PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_023526544.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
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Family | G2-like | ||||||||
Protein Properties | Length: 233aa MW: 26835.3 Da PI: 10.126 | ||||||||
Description | G2-like family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | G2-like | 92.3 | 4.1e-29 | 92 | 146 | 1 | 55 |
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 k+r++Wt+eLH++F+++v+qLGG+ kAtPk++l+lmk +gLtl h+kSHLQkYR+ XP_023526544.1 92 KKRIKWTEELHQKFMNCVDQLGGTRKATPKQLLHLMKTEGLTLIHIKSHLQKYRI 146 68****************************************************7 PP | |||||||
2 | Myb_DNA-binding | 45.5 | 1.7e-14 | 96 | 145 | 3 | 48 |
SS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 3 rWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 +WT+e+++++ ++v qlGg t+k + m +g+tl ++ks++qky+ XP_023526544.1 96 KWTEELHQKFMNCVDQLGGTrkaTPKQLLHLMKtEGLTLIHIKSHLQKYR 145 8************************************************7 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 233 aa Download sequence |
MATVVYSSNA PGRRRRATAK ITQKESSFVS TNTEDDQPHL HFSSFTFDSS KHQGEAQEQS 60 SCCQEFSGDC SWSWEELMGN ENKKSKSRIG SKKRIKWTEE LHQKFMNCVD QLGGTRKATP 120 KQLLHLMKTE GLTLIHIKSH LQKYRISQHI RDFSKAGKSE RETDKELMLA NQNRGKQLVE 180 AARQLLATQS SLNEQLEVQK NLISAIEEQM KQLRGVLERR GKPVVFRNEE ERK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G06800.1 | 1e-31 | G2-like family protein |