PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023526499.1

Organism

Cucurbita pepo subsp. pepo

Taxonomic ID

3664

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo

Family

GRF

Protein Properties

Length: 316aa MW: 35534.1 Da PI: 6.8844

Description

GRF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023526499.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRC	79.7	2.8e-25	77	120	1	44
WRC 1 daepgrCrRtDGKkWRCsrrvlegkklCErHlhrgrsrsrkske 44 d+epgrCrRtDGKkWRCs+++ +++k+CE+H+hrgr+rsrk++e XP_023526499.1 77 DPEPGRCRRTDGKKWRCSKEAFPDSKYCEKHMHRGRNRSRKPVE 120 79***************************************997 PP
2	QLQ	62.3	1.3e-21	11	46	1	36
QLQ 1 saFTaaQlqlLksQilAyKyLaanqPvPpeLlqaiq 36 s+FT++Q+q+L++Q+l++Ky+++++P+Pp+L++ ++ XP_023526499.1 11 SPFTPTQWQELEHQALIFKYMVSGVPIPPDLIFSVK 46 89******************************9987 PP

Sequence ? help Back to Top
Protein Sequence Length: 316 aa Download sequence
MNSSPKTCTT SPFTPTQWQE LEHQALIFKY MVSGVPIPPD LIFSVKRSLD SSLSARLFPH 60 QPIGWGCFEM GFGRKTDPEP GRCRRTDGKK WRCSKEAFPD SKYCEKHMHR GRNRSRKPVE 120 ISSSSSSSSS SSSMTCETQS YHQAPPPAAA AYHESSIHPF MYTQSSSSRP PCSDFSSNNS 180 NPQLFLYSGT HSQADKDYRD INGSREGVGV QAFFPSVAEV YNNQQPIAMD SYKGCSQFVT 240 QSHQIYNSKQ TRQEQEQHCF VLGTDFNKSS KSAKAEEEEQ EQEQDGETQK PLLHFFEDCP 300 PKNSDSWLDL ASNSNG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G13960.1	3e-68	GRF family protein