PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023526394.1

Organism

Cucurbita pepo subsp. pepo

Taxonomic ID

3664

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo

Family

bHLH

Protein Properties

Length: 325aa MW: 35760.6 Da PI: 6.2389

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023526394.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	56.3	5.7e-18	36	85	2	55
HHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 2 rrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 r +h+e E+rRR++iN++f+ Lr+l+P++ ++K +Ka+ L +++eYI+ Lq XP_023526394.1 36 RSKHSETEQRRRSKINERFQILRDLIPQN----DQKRDKASFLLEVIEYIQFLQ 85 899***********************9....9*****************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 325 aa Download sequence
MVKSSKSVHE RFQDDGNELG VKIEGKSGDS KASGHRSKHS ETEQRRRSKI NERFQILRDL 60 IPQNDQKRDK ASFLLEVIEY IQFLQEKLNM YEGSCQGWSS EPSKLVPWNY RAAESYVDHS 120 QVVKRGSNHE SAVVFSQAML TNAPNVMNAD MGPAAVLNAV DHTLVSATQG LPMSMHAQPI 180 VFEPVGRGSL STESLDEPAS GSENISSKTQ TELLQGRTHA TTGFLNHAVS DQEDLSVESE 240 MEGISGVYSH GLLSTLTQAL QASGVDLSQT NISVKVDVGR RANRSLSLSE DDKKQSLNNQ 300 MTAQSLHGYF SEDSEQAHKK LRTGV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G69010.1	2e-55	bHLH family protein