PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_023526393.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
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Family | bHLH | ||||||||
Protein Properties | Length: 326aa MW: 35888.8 Da PI: 6.3794 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 56.3 | 5.7e-18 | 36 | 85 | 2 | 55 |
HHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 2 rrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 r +h+e E+rRR++iN++f+ Lr+l+P++ ++K +Ka+ L +++eYI+ Lq XP_023526393.1 36 RSKHSETEQRRRSKINERFQILRDLIPQN----DQKRDKASFLLEVIEYIQFLQ 85 899*************************9....9*******************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 326 aa Download sequence |
MVKSSKSVHE RFQDDGNELG VKIEGKSGDS KASGHRSKHS ETEQRRRSKI NERFQILRDL 60 IPQNDQKRDK ASFLLEVIEY IQFLQEKLNM YEGSCQGWSS EPSKLVPWKN YRAAESYVDH 120 SQVVKRGSNH ESAVVFSQAM LTNAPNVMNA DMGPAAVLNA VDHTLVSATQ GLPMSMHAQP 180 IVFEPVGRGS LSTESLDEPA SGSENISSKT QTELLQGRTH ATTGFLNHAV SDQEDLSVES 240 EMEGISGVYS HGLLSTLTQA LQASGVDLSQ TNISVKVDVG RRANRSLSLS EDDKKQSLNN 300 QMTAQSLHGY FSEDSEQAHK KLRTGV |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G69010.1 | 7e-56 | bHLH family protein |