PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_023526358.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
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Family | MYB_related | ||||||||
Protein Properties | Length: 300aa MW: 33005.4 Da PI: 6.3831 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 47.7 | 3.6e-15 | 21 | 64 | 1 | 46 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 rg+++++E l+v+++ lG++ W+ Ia+ ++ gRt++++k++w++ XP_023526358.1 21 RGSFSPQEAALIVQLHSILGNR-WAQIAKQLP-GRTDNEVKNFWNS 64 899*******************.*********.***********96 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 300 aa Download sequence |
QRCGKSCRLR WINYLRPDLK RGSFSPQEAA LIVQLHSILG NRWAQIAKQL PGRTDNEVKN 60 FWNSNIKKKL ISHEVSALTT FSGHLQNPNV SINNEGFFIL NANPNLILTT SAHQDQPCLP 120 TSTLQAGYDL IDYKLQQFSN LNPNANLVHL LPSFSPSTNL LPHNPPSWQS LGGYRSQSLD 180 SDQLMVASGE FVTPMTTLPQ YVDGSILHPA KLCEVGEENI CSSVPQISAP SQDLDPFTKL 240 SSFPNGYYPQ DQCLAANQMA MEQIDMIMSS ILQIPSCSSS SALLGLSELS SNLVSSSWGV |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G13890.1 | 1e-43 | MYB family protein |