PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023526006.1
Organism
Cucurbita pepo subsp. pepo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family MYB_related
Protein Properties Length: 286aa    MW: 31842.2 Da    PI: 9.9657
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023526006.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding42.71.3e-135599147
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47
                     r +WT++E++++++a +++  + Wk+I + +g  +t  q++s+ qky
   XP_023526006.1 55 RESWTEQEHDKFLEALQLFDRD-WKKIEAFVG-SKTVIQIRSHAQKY 99
                     789*****************77.*********.*************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 286 aa     Download sequence    
MSMSYFPGID SVRPPTASLR TPAPPTSTSN CVASFPVSED ASKKIRKPYT ITKSRESWTE  60
QEHDKFLEAL QLFDRDWKKI EAFVGSKTVI QIRSHAQKYF LKIQKSGKSE HVPPPRPKKK  120
ASHPYPQKAP KNATTQSPGM YPPLSTPFES RYTYIPDSTA GFGLPSPHAS WSCSPVPSID  180
FSQVPKDRVK LAGPTSHSSS SGSTSRTRKI GEISDQGDQS MRNIVMPDFA QVYSFIGSVF  240
DPSVSGHLQR LRKMDPINLE TALLLMQNLA INLISPEFEN HTDFII
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G52660.23e-93MYB_related family protein