PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_023525775.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
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Family | NAC | ||||||||
Protein Properties | Length: 356aa MW: 39281.8 Da PI: 8.2836 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 179.4 | 9.5e-56 | 15 | 143 | 1 | 129 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk 95 lppGfrFhPtdeel+++yL kkv +++++ ++i+evd++k+ePw+Lp+k+k +ekewyfFs rd+ky+tg r+nrat++gyWkatgkd+e++s+ XP_023525775.1 15 LPPGFRFHPTDEELITYYLLKKVLDSTFTG-RAIAEVDLNKCEPWELPEKAKMGEKEWYFFSLRDRKYPTGLRTNRATEAGYWKATGKDREIYSA 108 79*************************999.89***************99999****************************************98 PP NAM 96 .kgelvglkktLvfykgrapkgektdWvmheyrle 129 + +lvg+kktLvfy+grapkgek++Wvmheyrle XP_023525775.1 109 kTYSLVGMKKTLVFYRGRAPKGEKSNWVMHEYRLE 143 55677****************************85 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 356 aa Download sequence |
MDVSPFSHYD DSHHLPPGFR FHPTDEELIT YYLLKKVLDS TFTGRAIAEV DLNKCEPWEL 60 PEKAKMGEKE WYFFSLRDRK YPTGLRTNRA TEAGYWKATG KDREIYSAKT YSLVGMKKTL 120 VFYRGRAPKG EKSNWVMHEY RLEGNFAYHY LSRTSKDEWV ISRVFQKSGA GGGGGGATSS 180 NGGGSKKARF VPGSVNVYPE PSSPSSVSLP PLLDSSLYSA PATISTASGN IPDRDSRSYN 240 SPAAREHVSC FSTTAGGSLN IPNYDFAPLP PLAAADPSTR FHRNIGLSAF PSLRSLQENL 300 QLPFFYSPAN LPSTTAVHHG NISSADIGAC SSAGNWAVSD ETRFMNSTEL DCMWSY |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G53950.1 | 1e-103 | NAC family protein |