PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_023525725.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
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Family | bHLH | ||||||||
Protein Properties | Length: 228aa MW: 25282.8 Da PI: 7.1947 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 25.1 | 3.2e-08 | 153 | 194 | 8 | 54 |
HHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 8 rErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 + r+RR++i +++ L++l+P K++ a++L +A Y+k L XP_023525725.1 153 AARKRREKISEKIRVLQRLVPGG-----SKMDTASMLDEAASYLKFL 194 67*******************95.....5****************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 228 aa Download sequence |
MDDLLWNGSW NNGEDDGCKE SLLFSDGSSR CSSPLLQELQ TVARILGLSE IETPTPEMRA 60 VELAVDPKSW PAGASSGGLL LEELENDKGI GVSPSSSNNY ETESSDRDQI MSRMKEMIYH 120 AAVFRPVNLG IETVEKKKKR RNVKMSKELQ TVAARKRREK ISEKIRVLQR LVPGGSKMDT 180 ASMLDEAASY LKFLRAQIKA LEGNGYKLGS NCTSFNPTIF PSNAYFPL |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 136 | 141 | KKKKRR |
2 | 136 | 158 | KKKKRRNVKMSKELQTVAARKRR |
3 | 136 | 160 | KKKKRRNVKMSKELQTVAARKRREK |
4 | 137 | 142 | KKKKRR |
5 | 137 | 159 | KKKKRRNVKMSKELQTVAARKRR |
6 | 137 | 161 | KKKKRRNVKMSKELQTVAARKRREK |
7 | 138 | 160 | KKKKRRNVKMSKELQTVAARKRR |
8 | 138 | 162 | KKKKRRNVKMSKELQTVAARKRREK |
9 | 139 | 161 | KKKKRRNVKMSKELQTVAARKRR |
10 | 155 | 160 | RKRREK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G21330.1 | 1e-27 | bHLH family protein |