PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_023525378.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
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Family | DBB | ||||||||
Protein Properties | Length: 290aa MW: 31280.7 Da PI: 4.4206 | ||||||||
Description | DBB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-B_box | 24.6 | 5.1e-08 | 4 | 34 | 5 | 35 |
zf-B_box 5 kCpeHeekelqlfCedCqqllCedClleeHk 35 C+ +++ e+ lfC+ ++ lC +C + H+ XP_023525378.1 4 QCDVCNKDEALLFCTADDAALCSTCDHSVHH 34 7******99********************74 PP | |||||||
2 | zf-B_box | 26.5 | 1.3e-08 | 56 | 87 | 4 | 35 |
zf-B_box 4 rkCpeHeekelqlfCedCqqllCedClleeHk 35 + C+ ++e ++ lfC++++ lC+dC + +H+ XP_023525378.1 56 PLCDICQERRAFLFCQQDRAILCKDCDFPIHS 87 78***************************994 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 290 aa Download sequence |
MKIQCDVCNK DEALLFCTAD DAALCSTCDH SVHHANVLAS KHLRFPLLHP NNNNFPLCDI 60 CQERRAFLFC QQDRAILCKD CDFPIHSVNE LTQKHDRFLL TGVKLSCVSA GNVPSSSSMS 120 EKMANASSAP VSNSPSIAES STSNAQTVGA STDGCEAMNG VEYFIDAISG WHFDDFLDSS 180 STDAPPFGFC KLQSDEVDGD WVFQFVDDLV ELETSADSFS SEDWGIWSPE EEAAVPLFCS 240 EIEMAERKKG RTLKEKTRGG GGGGGGGGGG GDGGISVPEV DLRPRRFRSS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G75540.1 | 1e-50 | DBB family protein |