PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023524591.1
Organism
Cucurbita pepo subsp. pepo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family NAC
Protein Properties Length: 317aa    MW: 35846.6 Da    PI: 5.1123
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023524591.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM161.33.6e-50181421127
             NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk 95 
                     + pGfrFhPtdeelv +yLk k+++++l + e i+++diyk++PwdLpk ++++ekewyf+++rd+ky+++ r+nr+t +g+Wkatg+d++v+s 
  XP_023524591.1  18 MLPGFRFHPTDEELVGFYLKMKIQQRPLCI-ELIRQLDIYKYDPWDLPKLAASGEKEWYFYCQRDRKYRNSARPNRVTGAGFWKATGTDRPVYS- 110
                     579************************999.89***************8888899***************************************. PP

             NAM  96 kgelvglkktLvfykgrapkgektdWvmheyr 127
                     +++ +glkk+Lvfykgra k+ ktdW+mhe+r
  XP_023524591.1 111 SKSIIGLKKSLVFYKGRACKAFKTDWMMHEFR 142
                     8899***************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 317 aa     Download sequence    
MEERNNEELV LEDDDDVMLP GFRFHPTDEE LVGFYLKMKI QQRPLCIELI RQLDIYKYDP  60
WDLPKLAASG EKEWYFYCQR DRKYRNSARP NRVTGAGFWK ATGTDRPVYS SKSIIGLKKS  120
LVFYKGRACK AFKTDWMMHE FRDPSNVMDS WAICRIFKKT NVSRRGVSST SKHEITYELN  180
VNGNGSVLCS KTAEDVVCNV SNDYLEGKLP QLSIPNEPIG GPSSFTAQPM GVADIDVSSL  240
LLNMSASLVG DFGCRAPETS EPFSWFQSVG QPDGLAEQPM YGQDNALLFE DSKPWESPPP  300
PPSIGHALSC IWDKLLN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G26870.14e-75NAC family protein