PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_023524481.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
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Family | B3 | ||||||||
Protein Properties | Length: 860aa MW: 95045.1 Da PI: 7.2747 | ||||||||
Description | B3 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | B3 | 59.3 | 6.7e-19 | 330 | 429 | 1 | 98 |
EEEE-..-HHHHTT-EE--HHH.HTT..---..--SEEEEEETTS-EEEEEE....EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE. CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh..ggkkeesktltledesgrsWevkliy..rkksgryvltkGWkeFvkangLkegDfvvFkldgrsefe 91 f+kvl+ sd+++ grlvlpk +ae++ +++ e+ ++++d +g++W++++++ +++s++yvl+ G ++ +L++gD+v+F++++ +++ XP_023524481.1 330 FEKVLSASDAGRIGRLVLPKACAEAYfpPISQSEGLPVRIQDVKGNEWTFQFRFwpNNNSRMYVLE-GVTPCIQSMQLQAGDTVTFSRID-PGGQ 422 99**************************555556677***************9989999999***9.********************887.7777 PP .EEEEE- CS B3 92 lvvkvfr 98 lv+++++ XP_023524481.1 423 LVMGFRK 429 7777765 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 860 aa Download sequence |
MASSRCMNTS CGAATPHDWT KGWPLGSAGF AHLCLNCGSA YENLVFCDTY HSEETGWRDC 60 SFCGKRIHCG CIASKSMFEY LDYGGIGCTT CVKRSRLDVI RRDEISNGFD AVTVGNVGLL 120 RPASVEDRVV RNGIKEEKLL QLCNIMEANE TDHFQQAQRV DRSASPAQNK VENLRSPFGE 180 VGTSFFNMTK LPVKCQPSVG SVAYSQLDTR LKDMQESLSQ PSLNITLGVP LGTPNFVVPL 240 SGSAAEEDEK SILPFQQGQR SRPIFPKPLK TGTTVNSETR KGMTPLVRIA RPPAEGRGKN 300 QLLPRYWPRI TDQELEQISG DLNSTIVPLF EKVLSASDAG RIGRLVLPKA CAEAYFPPIS 360 QSEGLPVRIQ DVKGNEWTFQ FRFWPNNNSR MYVLEGVTPC IQSMQLQAGD TVTFSRIDPG 420 GQLVMGFRKA TNSSDTQDAK ISTLPNGSHS GDASFSGVFQ NLPLRAGDIS LHKIENFGGR 480 MTSGQQPMST MDKKGTRNIG SKNKRLLMHS EDALELRLTW EEAQDLLRPP PSANPTIVTI 540 DDHEFEEYDE PPVFGKRTIF TVRPTGEQKQ WAQCDDCSKW RKLPVDVLLP PKWTCSDNIW 600 DLSRCTCSAP EEMNTKEQEN LLRASKDFKK RKIMKSQKSA QELEPSGLDA LASAAVLGDS 660 MADLQESGTT TRHPRHRQGC TCIVCIQPPS GKGKHKSTCT CNVCLTVKRR FKTLMLRKKK 720 RLSEREMETS LKEGNSQFDE SGTSGTLRGT SLQINHSENE RSQIRVKDEE AANSSGQIDL 780 NCHPDREDMQ LEVAGLSMMS LVEAASQPLD SYSKQIGVSS VTSEQHSSQP SSAESERPLS 840 EEGCHGSAHE STSDRGRGPH |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 708 | 719 | KRRFKTLMLRKK |
2 | 708 | 721 | KRRFKTLMLRKKKR |
3 | 716 | 722 | LRKKKRL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G30470.1 | 0.0 | B3 family protein |