PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023524227.1

Organism

Cucurbita pepo subsp. pepo

Taxonomic ID

3664

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo

Family

bHLH

Protein Properties

Length: 411aa MW: 44233.2 Da PI: 5.6147

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023524227.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	31.2	4e-10	239	287	3	55
HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +h+ +Er RR++i +++ L+el+P + +k Ka +L + ++Y++sLq XP_023524227.1 239 NSHSLAERVRREKISERMRLLQELVPGC----NKITGKAVMLDEIINYVQSLQ 287 58************************....999***************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 411 aa Download sequence
MGDLENDEMG FRNSSDGLLN CPSSDRTSVT MAMGSFYGSG WDPLVSLGQS ESFGAASMAS 60 SHRDFSNSFP IVLENHHHGG GSGTSQTVQY PTDLEMGTKL PCFGSGNYSD MFGSFGLADQ 120 ILGGCSSSYR NGGTANTAQT SQETLPPPSG EEAALGSPNG KIRKRALDSA FPFSSNTKSE 180 GKVKKDVSGE SSSTQEEKNP EMEQNLRSGK QAKEKSSNSG EAPKENYIHV RARRGQATNS 240 HSLAERVRRE KISERMRLLQ ELVPGCNKIT GKAVMLDEII NYVQSLQQQV EFLSMKLATV 300 NPDMNIDLER ILSKDVRGSN GSVLGFDHPG MSAAPPVVPA HRMFQFQGMM SNMASTSTST 360 QFPSLPQTML ESDIQTLLQM GFDSGSAIDN LGPNGRVHNL IALHSELPDG N

Sequence ? help Back to Top

Protein Sequence Length: 411 aa Download sequence

MGDLENDEMG FRNSSDGLLN CPSSDRTSVT MAMGSFYGSG WDPLVSLGQS ESFGAASMAS  60
SHRDFSNSFP IVLENHHHGG GSGTSQTVQY PTDLEMGTKL PCFGSGNYSD MFGSFGLADQ  120
ILGGCSSSYR NGGTANTAQT SQETLPPPSG EEAALGSPNG KIRKRALDSA FPFSSNTKSE  180
GKVKKDVSGE SSSTQEEKNP EMEQNLRSGK QAKEKSSNSG EAPKENYIHV RARRGQATNS  240
HSLAERVRRE KISERMRLLQ ELVPGCNKIT GKAVMLDEII NYVQSLQQQV EFLSMKLATV  300
NPDMNIDLER ILSKDVRGSN GSVLGFDHPG MSAAPPVVPA HRMFQFQGMM SNMASTSTST  360
QFPSLPQTML ESDIQTLLQM GFDSGSAIDN LGPNGRVHNL IALHSELPDG N

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G10120.1	1e-72	bHLH family protein