PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023524111.1

Organism

Cucurbita pepo subsp. pepo

Taxonomic ID

3664

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo

Family

MYB_related

Protein Properties

Length: 736aa MW: 82994.8 Da PI: 4.6472

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023524111.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	30.7	7.1e-10	583	624	3	46
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 +W++ + e++++av+q+G++ + I + ++ g+t+ q+k+++ + XP_023524111.1 583 KWSKHDTERFYEAVRQFGTD-FCMIQQLFP-GKTRHQIKLKFKN 624 8*****************.*****.********987 PP

Sequence ? help Back to Top
Protein Sequence Length: 736 aa Download sequence
MDPFDDILSD PSVSSRTGSR FQPKIKPRPK KPTLAPQSCT HSQDKKETVS DAKSCHDGRG 60 NTKSIESSSQ LPVIEENKES EDDLLLATAR SDFISSHPPS VESAKTVDSM QLDFDSCGSI 120 LPSGSTTDDP VGVKKLTDTK NTGILNYSTP SSSTAHEATV LDQSGLGSIQ TEDRHFSDGK 180 IPEENIDIFY ELEYLDDFHN QPKNEADPAS LNQASISSED GDLDKQRFQE RGAGADITMD 240 TISSGDTSPS EQPACNYTTK PKIKTAEEDA CMEISQPEIS DMLPPSPQVI SHDTRCMHDT 300 SIGSDFDGIL NDSSINFDGY TPVNQHTEAP VNVEPLAFDS YDDILVDDFN SDDQDPSREV 360 VFRVVRLAKE NLQWNQIFLS RKRCSPKLVK KSSRAKLRGS RERRFLINLM SQKMVLTRIG 420 ISPMKPQKLA HLEEKKLQKS LQNHLVIVKN QLGSASRLIN QFPIRKPKSV LRSSPIQLVG 480 IEVNKVLLET PEDEIDFQKI SFRDLIIYHE YKEKLEKKEA SMRKSATNQR TDTAGEEIFN 540 DGEESLASEQ GRGTDDEETP DVVDMTSAYF NYHSFMDKTP RIKWSKHDTE RFYEAVRQFG 600 TDFCMIQQLF PGKTRHQIKL KFKNEERHHP FRLSDAVTNR ATDHTQFLSL IGQLKEAANK 660 AKQESNQDEL TENTGDEELP ELSPETNEEV AKPEGEEVQE TGKEECIGEI HSPLKADENE 720 SDEDDPHRWD EYKFDF

Sequence ? help Back to Top

Protein Sequence Length: 736 aa Download sequence

MDPFDDILSD PSVSSRTGSR FQPKIKPRPK KPTLAPQSCT HSQDKKETVS DAKSCHDGRG  60
NTKSIESSSQ LPVIEENKES EDDLLLATAR SDFISSHPPS VESAKTVDSM QLDFDSCGSI  120
LPSGSTTDDP VGVKKLTDTK NTGILNYSTP SSSTAHEATV LDQSGLGSIQ TEDRHFSDGK  180
IPEENIDIFY ELEYLDDFHN QPKNEADPAS LNQASISSED GDLDKQRFQE RGAGADITMD  240
TISSGDTSPS EQPACNYTTK PKIKTAEEDA CMEISQPEIS DMLPPSPQVI SHDTRCMHDT  300
SIGSDFDGIL NDSSINFDGY TPVNQHTEAP VNVEPLAFDS YDDILVDDFN SDDQDPSREV  360
VFRVVRLAKE NLQWNQIFLS RKRCSPKLVK KSSRAKLRGS RERRFLINLM SQKMVLTRIG  420
ISPMKPQKLA HLEEKKLQKS LQNHLVIVKN QLGSASRLIN QFPIRKPKSV LRSSPIQLVG  480
IEVNKVLLET PEDEIDFQKI SFRDLIIYHE YKEKLEKKEA SMRKSATNQR TDTAGEEIFN  540
DGEESLASEQ GRGTDDEETP DVVDMTSAYF NYHSFMDKTP RIKWSKHDTE RFYEAVRQFG  600
TDFCMIQQLF PGKTRHQIKL KFKNEERHHP FRLSDAVTNR ATDHTQFLSL IGQLKEAANK  660
AKQESNQDEL TENTGDEELP ELSPETNEEV AKPEGEEVQE TGKEECIGEI HSPLKADENE  720
SDEDDPHRWD EYKFDF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G39160.1	1e-27	MYB_related family protein