PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023523895.1

Organism

Cucurbita pepo subsp. pepo

Taxonomic ID

3664

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo

Family

Nin-like

Protein Properties

Length: 757aa MW: 85540.5 Da PI: 7.0282

Description

Nin-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023523895.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	RWP-RK	93.5	1.5e-29	512	562	2	52
RWP-RK 2 ekeisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiksl 52 ek+i+le+l++yF++++kdAAk++gvc+T+LKriCRq+GIkRWP+Rkik++ XP_023523895.1 512 EKSITLEVLRQYFAGSLKDAAKSIGVCPTTLKRICRQHGIKRWPSRKIKKV 562 799**********************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 757 aa Download sequence
MFVLPKHGLE FLLLEMNGVF NTNLITRSDQ EEPRNMLSNE ASPGRERVDV GQEGCSDQSE 60 NNALEGSELC RRLGMGAGEH MGSAPSVMER LIMAVEYIKD IVRDKDVLVQ VWVPVSRGGR 120 SVLITNQLPF SQNSSCTRLA KYRDVSVNYE FTADEESKKA LGLPGRVFLR KVPEWTPDVR 180 FFRSDEYPRV DHAHEHDVRG TIALPVFEQG SKSCLGVIEV VMVTQQIKYG SEHEILCKAL 240 QAVKLRSSDV ISPPNQKVFN RFNEAVLLEI RDTLRTACET HGLPLAQAWA SCIQQSKEGC 300 RHSDENYSCC VSTVDRACFV ADTRIQDFHE ACSEHHLLKG EGIVGMAFKS NEPCFSSDIA 360 SFRNTEYPLS HHAKLFGLHA AVALRLRCIF ISKMDFVLEF FLPVHCRDPE EQRILLTSLS 420 TVIQYSCRNL RLVTDEECRE ENMEQPLPTN SLLASSVQNI QQCSGSVSLL QELNYDLNGV 480 VEDSEECPTV GNGIFADISM GRTGEKRRTK VEKSITLEVL RQYFAGSLKD AAKSIGVCPT 540 TLKRICRQHG IKRWPSRKIK KVGHSLQKLQ LVIDSVNSAS GAFQTSSLYS NLQELASPYV 600 RKMGDGLKTS SDLGDAASKT APSSLSQSSN SSQCFSFCRH PATGCVMQTA KESDQMRVKV 660 SYGEERIRFR VQKWWRYEEL VKEVGRRFNI RDISKYDLKY LDDECEWVLL TSDAYLQDCF 720 HMYKSSPLQT IKLLLHPSPR HMREEPQTPP FPTFYML

Sequence ? help Back to Top

Protein Sequence Length: 757 aa Download sequence

MFVLPKHGLE FLLLEMNGVF NTNLITRSDQ EEPRNMLSNE ASPGRERVDV GQEGCSDQSE  60
NNALEGSELC RRLGMGAGEH MGSAPSVMER LIMAVEYIKD IVRDKDVLVQ VWVPVSRGGR  120
SVLITNQLPF SQNSSCTRLA KYRDVSVNYE FTADEESKKA LGLPGRVFLR KVPEWTPDVR  180
FFRSDEYPRV DHAHEHDVRG TIALPVFEQG SKSCLGVIEV VMVTQQIKYG SEHEILCKAL  240
QAVKLRSSDV ISPPNQKVFN RFNEAVLLEI RDTLRTACET HGLPLAQAWA SCIQQSKEGC  300
RHSDENYSCC VSTVDRACFV ADTRIQDFHE ACSEHHLLKG EGIVGMAFKS NEPCFSSDIA  360
SFRNTEYPLS HHAKLFGLHA AVALRLRCIF ISKMDFVLEF FLPVHCRDPE EQRILLTSLS  420
TVIQYSCRNL RLVTDEECRE ENMEQPLPTN SLLASSVQNI QQCSGSVSLL QELNYDLNGV  480
VEDSEECPTV GNGIFADISM GRTGEKRRTK VEKSITLEVL RQYFAGSLKD AAKSIGVCPT  540
TLKRICRQHG IKRWPSRKIK KVGHSLQKLQ LVIDSVNSAS GAFQTSSLYS NLQELASPYV  600
RKMGDGLKTS SDLGDAASKT APSSLSQSSN SSQCFSFCRH PATGCVMQTA KESDQMRVKV  660
SYGEERIRFR VQKWWRYEEL VKEVGRRFNI RDISKYDLKY LDDECEWVLL TSDAYLQDCF  720
HMYKSSPLQT IKLLLHPSPR HMREEPQTPP FPTFYML

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G76350.1	0.0	Nin-like family protein