PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023523840.1

Organism

Cucurbita pepo subsp. pepo

Taxonomic ID

3664

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo

Family

NAC

Protein Properties

Length: 347aa MW: 39444 Da PI: 8.1504

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023523840.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	172	1.9e-53	9	138	1	129
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvka...eekewyfFskrdkkyatgkrknratksgyWkatgkdkev 92 +ppGfrFhPtdeel+++yLkkkv+ +k+++ +v++evd++k+ePwdL++k++ ++ewyfFs++d+ky+tg+r+nrat++g+Wkatg+dk + XP_023523840.1 9 VPPGFRFHPTDEELLHYYLKKKVSFQKFDM-DVVREVDLNKIEPWDLQEKCRIgstPQNEWYFFSHKDRKYPTGSRTNRATNAGFWKATGRDKCI 102 69**************************.99**********964433122456********************************** PP NAM 93 lskkgelvglkktLvfykgrapkgektdWvmheyrle 129 + + +++g++ktLvfy+grap+g+ktdW+mheyrle XP_023523840.1 103 RN-SYKKIGMRKTLVFYRGRAPHGQKTDWIMHEYRLE 138 9.8999***************************85 PP

Sequence ? help Back to Top
Protein Sequence Length: 347 aa Download sequence
MASSGGTGVP PGFRFHPTDE ELLHYYLKKK VSFQKFDMDV VREVDLNKIE PWDLQEKCRI 60 GSTPQNEWYF FSHKDRKYPT GSRTNRATNA GFWKATGRDK CIRNSYKKIG MRKTLVFYRG 120 RAPHGQKTDW IMHEYRLEDA DDPHSNNSED GWVVCRVFKK KNLFKVTREG EGGSSANSAD 180 HHLNNAHSSA SIATSRTFMH NQLRQPQQNY ATHPTFELNK SDLALHYMPT TAPSSHFSHP 240 LFHPNISTLN HKPLGSAAAA YDYPSLSSLP PDTPLMVKQL MSNPETDQPG DGMTEPWAML 300 DRLVTSHLGN EDSSKDVRFE DENGSSSVSQ INQLSLRGEM DFWGYAK

Sequence ? help Back to Top

Protein Sequence Length: 347 aa Download sequence

MASSGGTGVP PGFRFHPTDE ELLHYYLKKK VSFQKFDMDV VREVDLNKIE PWDLQEKCRI  60
GSTPQNEWYF FSHKDRKYPT GSRTNRATNA GFWKATGRDK CIRNSYKKIG MRKTLVFYRG  120
RAPHGQKTDW IMHEYRLEDA DDPHSNNSED GWVVCRVFKK KNLFKVTREG EGGSSANSAD  180
HHLNNAHSSA SIATSRTFMH NQLRQPQQNY ATHPTFELNK SDLALHYMPT TAPSSHFSHP  240
LFHPNISTLN HKPLGSAAAA YDYPSLSSLP PDTPLMVKQL MSNPETDQPG DGMTEPWAML  300
DRLVTSHLGN EDSSKDVRFE DENGSSSVSQ INQLSLRGEM DFWGYAK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G10350.1	1e-149	NAC family protein