PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_023523626.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
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Family | HD-ZIP | ||||||||
Protein Properties | Length: 761aa MW: 85184.4 Da PI: 6.6882 | ||||||||
Description | HD-ZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 67.5 | 1.7e-21 | 100 | 155 | 1 | 56 |
TT--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 1 rrkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 r+k +++t+eq++e+e+lF+ +++p++++r++L+k+lgL+ rqVk+WFqNrR++ k XP_023523626.1 100 RKKYHRHTTEQIREMEALFKDSPHPDEKQRQQLSKRLGLSPRQVKFWFQNRRTQIK 155 7999************************************************9877 PP | |||||||
2 | START | 202.7 | 1.6e-63 | 274 | 495 | 5 | 206 |
HHHHHHHHHHHHC-TT-EEEE....EXCCTTEEEEEEESSS.......SCEEEEEEEECCSCHHHHHHHHHCCCGGCT-TT-S....EEEEEEEE CS START 5 eaaqelvkkalaeepgWvkss....esengdevlqkfeeskv......dsgealrasgvvdmvlallveellddkeqWdetla....kaetlevi 85 +a++el ++a +ep+W +s e++n+de+l++f +++ +++ea+r+++vv+m++ +l ++++d + qW+e+++ ka+t++vi XP_023523626.1 274 QALEELKTMAVTNEPLWIRSIetgrEILNYDEYLKTFHLKNSnacwlkRHIEASRDTTVVFMEPSRLIQSFMDEN-QWKEMFPsmisKAATIDVI 367 67899999*****************************887779********************************.******************* PP CTT......EEEEEEEEXXTTXX-SSX.EEEEEEEEEEE.TTS-EEEEEEEEE-TTS--.-TTSEE-EESSEEEEEEEECTCEEEEEEEE-EE-- CS START 86 ssg......galqlmvaelqalsplvp.RdfvfvRyirqlgagdwvivdvSvdseqkppesssvvRaellpSgiliepksnghskvtwvehvdlk 173 ++g ga+qlm+ e q+l+plvp R+ +f+R+++ql a++w+ivdvS+d+ ++ + ++s+++ +++pSg++i+++sngh+kvt+veh +++ XP_023523626.1 368 CNGevanwnGAVQLMFVEVQLLTPLVPtREIYFIRHCKQLDAEQWAIVDVSIDNVDDTNIDASLMKYRKRPSGCIIKDESNGHCKVTMVEHLECE 462 *********************************************************999*********************************** PP SSXXHHHHHHHHHHHHHHHHHHHHHHTXXXXXX CS START 174 grlphwllrslvksglaegaktwvatlqrqcek 206 + +h+l+r +v++g+a+ga++w+atlq qce+ XP_023523626.1 463 KTKVHNLYRTIVNNGTAFGARHWMATLQLQCER 495 *******************************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 761 aa Download sequence |
MLADMSNNNN RLAFTKDFFS SPALSLTLAG IFRRGEMAEK GDVEMEEVDD GSGEVRRDDA 60 AEVSSENLGP VRSRSDDDFE GGGVHEENEE GDGGCLVKRR KKYHRHTTEQ IREMEALFKD 120 SPHPDEKQRQ QLSKRLGLSP RQVKFWFQNR RTQIKAIQER HENTLLKAEM EKLREENKAM 180 RELTKKKVGC PNCGTANAAE DRTAFTTTEQ LRIKNAKLKA EVEKLRAALG NHSRSSISPS 240 YSSGNDQETN RNCLDFYTGI FGLEKTRIME RVHQALEELK TMAVTNEPLW IRSIETGREI 300 LNYDEYLKTF HLKNSNACWL KRHIEASRDT TVVFMEPSRL IQSFMDENQW KEMFPSMISK 360 AATIDVICNG EVANWNGAVQ LMFVEVQLLT PLVPTREIYF IRHCKQLDAE QWAIVDVSID 420 NVDDTNIDAS LMKYRKRPSG CIIKDESNGH CKVTMVEHLE CEKTKVHNLY RTIVNNGTAF 480 GARHWMATLQ LQCERLAFFM ATNIPIKDST GVATLAGRKS TLKLAERMSS SFSQAVAASS 540 YQTWTKVVGK TGEDIRVCSR KNLSDPGEPI GVILCAVFSL WLPVPPHTLF HFLRDEARRN 600 EWDAMFGGDK VESIANLAKG QDRGNSVSIQ TRGSKESSSM WILQDASTNS SESMVVYSGV 660 DVAGMQSVMT GCDSGSLTIL PSGFSILPDG AESRSLLITR QKDHKSSDTH GGALLTAAVQ 720 IVTDASPSAK PTVDSVEYVK SIVCCTMKNI RSSLGCCEDD C |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G79840.1 | 0.0 | HD-ZIP family protein |