PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_023523177.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
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Family | MYB | ||||||||
Protein Properties | Length: 218aa MW: 25079.3 Da PI: 6.6722 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 48.6 | 1.8e-15 | 9 | 56 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT++Ed +lv+ v ++G ++W+ Ia+ g++R +k+c++rw +yl XP_023523177.1 9 KGPWTEQEDFQLVCFVGLFGDRRWDFIAKVSGLKRNGKSCRLRWVNYL 56 79******************************9*************97 PP | |||||||
2 | Myb_DNA-binding | 53.8 | 4.3e-17 | 62 | 106 | 1 | 47 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 rg+++++E+ l +d++ ++G++ W++Iar+++ gRt++++k++w+++ XP_023523177.1 62 RGKMSPQEERLVLDLHSKWGNR-WSKIARKLP-GRTDNEIKNFWRTH 106 89********************.*********.************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 218 aa Download sequence |
MVQEESVRKG PWTEQEDFQL VCFVGLFGDR RWDFIAKVSG LKRNGKSCRL RWVNYLHPGL 60 KRGKMSPQEE RLVLDLHSKW GNRWSKIARK LPGRTDNEIK NFWRTHVRKL AQEKKKAAVH 120 HVVVSPSSSS TVDSVPTIDI GEESFYDTGG DWSCYMGEED EKGYSYSMDD IWRDIDDESV 180 VKAVCDEKLS CGPVASPAPW EYGEYSPPWK VAEEKFGI |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G46130.1 | 2e-79 | MYB family protein |