PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_023523160.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
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Family | MYB | ||||||||
Protein Properties | Length: 268aa MW: 30568.7 Da PI: 7.1188 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 57.4 | 3.4e-18 | 21 | 68 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+WT eEd ll+++++ +G g+W++ a+ g++Rt+k+c++rw++yl XP_023523160.1 21 RGPWTVEEDTLLIHYIAAHGEGQWNLLAKQAGLKRTGKSCRLRWLNYL 68 89********************************************97 PP | |||||||
2 | Myb_DNA-binding | 48.9 | 1.5e-15 | 74 | 117 | 1 | 46 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 rg+ T +E++l+++++ ++G++ W++Ia++++ gRt++++k++w++ XP_023523160.1 74 RGNLTLQEQLLILELHSKWGNR-WSKIAQELP-GRTDNEIKNYWRT 117 7899******************.*********.***********96 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 268 aa Download sequence |
MAGVSNTAAH RPSEEESELR RGPWTVEEDT LLIHYIAAHG EGQWNLLAKQ AGLKRTGKSC 60 RLRWLNYLKP DIKRGNLTLQ EQLLILELHS KWGNRWSKIA QELPGRTDNE IKNYWRTRVQ 120 KQLRQLKVQA HSRKLLDAIC HLSMLEAMDQ TSNYSINLPP SLHNMNLPNS SNSTVVLPAN 180 HGSRAPPPPP PPRSVQQWPE VSAWPPSPCG EFMEAWRFDM VGQKQQHEAV GALGDWEVGD 240 RDAQMIAPDW VLEDAMVENL WSLDHHLI |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G68320.1 | 8e-61 | MYB family protein |