PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023522975.1
Organism
Cucurbita pepo subsp. pepo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family NF-YB
Protein Properties Length: 211aa    MW: 23328.9 Da    PI: 8.1135
Description NF-YB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023522975.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NF-YB176.62.4e-5531126297
           NF-YB   2 reqdrflPianvsrimkkvlPanakiskdaketvqecvsefisfvtseasdkcqrekrktingddllwalatlGfedyveplkvylkkyrelege 96 
                     +eqdrflPianvsrimkk lP nakisk+aketvqecvsefisf+t+easdkcqrekrktingddllwa++tlGfe+yv +lk+yl+kyre+e+e
  XP_023522975.1  31 KEQDRFLPIANVSRIMKKSLPPNAKISKEAKETVQECVSEFISFITGEASDKCQREKRKTINGDDLLWAMTTLGFENYVTTLKTYLNKYRETEEE 125
                     89*******************************************************************************************98 PP

           NF-YB  97 k 97 
                     k
  XP_023522975.1 126 K 126
                     7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 211 aa     Download sequence    
MNGHKRNPTT ATNSSPVGSP TSGNISDSST KEQDRFLPIA NVSRIMKKSL PPNAKISKEA  60
KETVQECVSE FISFITGEAS DKCQREKRKT INGDDLLWAM TTLGFENYVT TLKTYLNKYR  120
ETEEEKHSLA RQDDHSPSPA KSTAAVCPAE PIIGGKSANS VMDFQNLNSG FYSLGAHNHN  180
HNHHQGNQKS YHIIDGVGFG ESLRGKYEWS P
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G14540.16e-62NF-YB family protein