PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_023522820.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
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Family | NAC | ||||||||
Protein Properties | Length: 148aa MW: 17170.9 Da PI: 9.7716 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 180.4 | 4.7e-56 | 17 | 142 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk 95 lppGfrFhPtdeel+++yL +kv ++++++ +i e+d++k+ePwdLp ++k +ekewyfF+ +d+ky+tg r+nrat+sgyWkatgkdke+++ XP_023522820.1 17 LPPGFRFHPTDEELITHYLSPKVLNTNFTA-VAIGEADLNKSEPWDLPGRAKMGEKEWYFFCVKDRKYPTGLRTNRATDSGYWKATGKDKEIFR- 109 79*************************999.67***************99999*****************************************. PP NAM 96 kgelvglkktLvfykgrapkgektdWvmheyrl 128 ++ vg+kktLvfy+grapkg+k++Wvmheyrl XP_023522820.1 110 AKRIVGMKKTLVFYTGRAPKGHKSNWVMHEYRL 142 9999***************************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 148 aa Download sequence |
MCVCVHMNSI MDEQIELPPG FRFHPTDEEL ITHYLSPKVL NTNFTAVAIG EADLNKSEPW 60 DLPGRAKMGE KEWYFFCVKD RKYPTGLRTN RATDSGYWKA TGKDKEIFRA KRIVGMKKTL 120 VFYTGRAPKG HKSNWVMHEY RLAPKFPL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G29035.1 | 4e-82 | NAC family protein |