PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023522762.1
Organism
Cucurbita pepo subsp. pepo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family bHLH
Protein Properties Length: 153aa    MW: 17753.9 Da    PI: 8.966
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023522762.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH51.42e-1651100255
                     HHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
             HLH   2 rrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                     r +h+  E+rRR++iN++f+ Lr+l+P++    ++K + ++ L +++eY+++Lq
  XP_023522762.1  51 RSKHSVTEQRRRSKINERFQILRDLIPHS----DQKRDTVSFLLEVIEYVQYLQ 100
                     899*************************9....8*******************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 153 aa     Download sequence    
MRTAKSVQED EEYEEDELVA KREGPASTYN ANSSIGNSKD GKNNDKANAI RSKHSVTEQR  60
RRSKINERFQ ILRDLIPHSD QKRDTVSFLL EVIEYVQYLQ EKVQKYEGSY QNWGGEPTKL  120
IPWVKTKALP SFYLGVVIHY LARFSCCNSY NNK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G69010.13e-53bHLH family protein