PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | XP_023522654.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
|
||||||||
Family | bHLH | ||||||||
Protein Properties | Length: 154aa MW: 17572.3 Da PI: 9.6842 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 39.9 | 7.4e-13 | 63 | 114 | 1 | 55 |
CHHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 1 rrrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +r++h ++Er+RR+++N+ + Lr+++P++ + ++ + a+i+ +++ +++L+ XP_023522654.1 63 QRMTHIAVERNRRKQMNEYLCVLRSMMPSS---YTQRGDQASIVGGTIKLVRELE 114 79****************************...9***************999985 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 154 aa Download sequence |
MVLGLESAVF QEDKLIGCGW KNVEAMEAGE FVGGGLRATV APVGKRWGRR GKMVKKREEI 60 EKQRMTHIAV ERNRRKQMNE YLCVLRSMMP SSYTQRGDQA SIVGGTIKLV RELEQLVQWL 120 EGKKQRHEHI CYAGQDYSGE SKVEVRVIES YANI |
Nucleic Localization Signal ? help Back to Top | |||
---|---|---|---|
No. | Start | End | Sequence |
1 | 64 | 75 | RMTHIAVERNRR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT1G22490.1 | 1e-33 | bHLH family protein |