PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023522411.1

Organism

Cucurbita pepo subsp. pepo

Taxonomic ID

3664

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo

Family

NAC

Protein Properties

Length: 272aa MW: 30912.8 Da PI: 8.6859

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023522411.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	175.7	1.3e-54	9	134	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk 95 lppGfrFhPtdeel+++yLk+++++k++++ ++i+evdiyk++PwdLp+k++++e+ewyfFs+rd+ky++g r+nra+ sgyWkatg+dk+++s XP_023522411.1 9 LPPGFRFHPTDEELIMFYLKNQATSKPCPV-SIIPEVDIYKFDPWDLPEKADSGENEWYFFSPRDRKYPNGVRPNRAAVSGYWKATGTDKAIYS- 101 79**************************.89***********99999*************************************. PP NAM 96 kgelvglkktLvfykgrapkgektdWvmheyrl 128 ++ vg+kk Lvfykg+ pkg+ktdW+mheyrl XP_023522411.1 102 ASKYVGVKKALVFYKGKPPKGVKTDWIMHEYRL 134 9999*************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 272 aa Download sequence
MKEKGCSDLP PGFRFHPTDE ELIMFYLKNQ ATSKPCPVSI IPEVDIYKFD PWDLPEKADS 60 GENEWYFFSP RDRKYPNGVR PNRAAVSGYW KATGTDKAIY SASKYVGVKK ALVFYKGKPP 120 KGVKTDWIMH EYRLIESNKR SVKQSGSMRL DDWVLCRIYK KRHSNKGLSE EKTEELAAQN 180 EVGEGNGQQM MKFPRTFSIT HLLDLDYLGP ISQLFNDNSS ANPTLGFQST AAHTNVGKVE 240 QGATPFDYSS ATTDFNQAFF LNPAYDWNGL SR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G69490.1	1e-112	NAC family protein