PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023522369.1

Organism

Cucurbita pepo subsp. pepo

Taxonomic ID

3664

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo

Family

FAR1

Protein Properties

Length: 846aa MW: 97337.1 Da PI: 7.3206

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023522369.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	85.4	8.9e-27	88	190	1	91
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk............tekerrtraetrtgCkaklkvkkekdgkwevtklel 83 +fY+eYA+++GF++ +++s++sk+++e+++++f Cs++g ++e +k+ +e++ +ra +t+Cka+++vk++ dgkw+++++++ XP_023522369.1 88 SFYQEYARSMGFNTAIQNSRRSKTSREFIDAKFACSRYGMKREYDKSfnrprvrqtkqeSENSTGRRACAKTDCKASMHVKRRADGKWVIHSFVK 182 5*****************************************999*99976555555559999********************** PP FAR1 84 eHnHelap 91 eHnHel p XP_023522369.1 183 EHNHELLP 190 ***975 PP

Sequence ? help Back to Top
Protein Sequence Length: 846 aa Download sequence
MDIDLRLPSG EHDKDEESNA INNMLDVKEK LHNGVIGSGS MVDTTEGMHI EDGGDLNPPL 60 LDMVVFKEDT NLEPLPGMEF ESHSEAYSFY QEYARSMGFN TAIQNSRRSK TSREFIDAKF 120 ACSRYGMKRE YDKSFNRPRV RQTKQESENS TGRRACAKTD CKASMHVKRR ADGKWVIHSF 180 VKEHNHELLP AQAVSEQTRK MYAAMARQFA EYKNVVGLKN DSKNPFDKVR NFAFDAGDAR 240 ILLDFLTQMQ NLNSNFFYAV DIGEDHRLRN LFWIDAKSRH DYIYFNDVVS LDTTYIRNKY 300 KLPLAFFVGV NQHYQFMLLG CALLSDESPT TYAWLLHVWL KAIGGQAPKV IITDHDKVLK 360 SVIQEVLPNV YHHFTLWHIL AKISENLGNV IKRHENFMAK FEKCIYRSWT TEEFEKRWWK 420 LVDRFELRED ELVQSLCEDQ RQWAPTYMKD VFLAGMSVAQ RSESVNSFLD KYLHKKTTVQ 480 EFVKQYESIL QDRYEEEAKA DSDTWNKQPT LRSPSPFEKS ISGLYTHAVF KKFQVEVLGA 540 VACFPRKEKE DEKSITYHVQ DFEKNLVFIV VWNGLKSEVS CLCRLYEYKG YLCRHAMVVL 600 QKCELSTIPT QYILKRWTRD AKSRHLLGEE PELVQSRVQR YNDLCQRALR LIEEGSLSQE 660 SYSVAAHALD ETLGNCIGVN NSNRTFLEAG PSAAHSLLCI EEDSQIRNIG KTNKKKNPTK 720 KRKVNSEPDI MTVGAHDNLQ HMDKLSSRAV TLDGYFGAQP SVQGMVQLNL MAPTRDNYYG 780 NQQAIQGLGQ LNSIAPSHDG YYPAQPSIHG LGQMDFFRAP AGFAYGIRDD PNVRTTQLHD 840 DASRHA

Sequence ? help Back to Top

Protein Sequence Length: 846 aa Download sequence

MDIDLRLPSG EHDKDEESNA INNMLDVKEK LHNGVIGSGS MVDTTEGMHI EDGGDLNPPL  60
LDMVVFKEDT NLEPLPGMEF ESHSEAYSFY QEYARSMGFN TAIQNSRRSK TSREFIDAKF  120
ACSRYGMKRE YDKSFNRPRV RQTKQESENS TGRRACAKTD CKASMHVKRR ADGKWVIHSF  180
VKEHNHELLP AQAVSEQTRK MYAAMARQFA EYKNVVGLKN DSKNPFDKVR NFAFDAGDAR  240
ILLDFLTQMQ NLNSNFFYAV DIGEDHRLRN LFWIDAKSRH DYIYFNDVVS LDTTYIRNKY  300
KLPLAFFVGV NQHYQFMLLG CALLSDESPT TYAWLLHVWL KAIGGQAPKV IITDHDKVLK  360
SVIQEVLPNV YHHFTLWHIL AKISENLGNV IKRHENFMAK FEKCIYRSWT TEEFEKRWWK  420
LVDRFELRED ELVQSLCEDQ RQWAPTYMKD VFLAGMSVAQ RSESVNSFLD KYLHKKTTVQ  480
EFVKQYESIL QDRYEEEAKA DSDTWNKQPT LRSPSPFEKS ISGLYTHAVF KKFQVEVLGA  540
VACFPRKEKE DEKSITYHVQ DFEKNLVFIV VWNGLKSEVS CLCRLYEYKG YLCRHAMVVL  600
QKCELSTIPT QYILKRWTRD AKSRHLLGEE PELVQSRVQR YNDLCQRALR LIEEGSLSQE  660
SYSVAAHALD ETLGNCIGVN NSNRTFLEAG PSAAHSLLCI EEDSQIRNIG KTNKKKNPTK  720
KRKVNSEPDI MTVGAHDNLQ HMDKLSSRAV TLDGYFGAQP SVQGMVQLNL MAPTRDNYYG  780
NQQAIQGLGQ LNSIAPSHDG YYPAQPSIHG LGQMDFFRAP AGFAYGIRDD PNVRTTQLHD  840
DASRHA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G22170.2	0.0	FAR1 family protein