PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_023522056.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
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Family | bHLH | ||||||||
Protein Properties | Length: 343aa MW: 37321.2 Da PI: 7.2221 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 15 | 4.4e-05 | 231 | 269 | 12 | 55 |
HHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 12 RRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 R +++ ++++ L++l+ + +K + a++L +A+ YIk Lq XP_023522056.1 231 RKEKLGDRIAALQQLVAPF-----GKTDTASVLMEAIGYIKFLQ 269 7788899*********998.....8******************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 343 aa Download sequence |
MAGLPISLLR SDCGVKNTNS SMLLQDLGFQ WNGVSSSGSF FSQFLHAGGK IKEEMLNSPS 60 TNQDFHPFPS TNHVKNNDSD LNDPSHKLFI KTLINGGDHT EPGEFFNKIY PSINVSDWNL 120 SSPPPPPPPP FSNSLDLNLQ TPPDLFHSQD SFGIFKQTLS DFHDQIHPPP SAAILPCISS 180 KVTTPFSPEL TEPKRPCTCI EPTLNQPSPP PPPLKKSRLD SRASCPPFKV RKEKLGDRIA 240 ALQQLVAPFG KTDTASVLME AIGYIKFLQN QVETLSVPYM KPSCNKTTGP TYRSPVEGGH 300 EGQLDRDLRS RGLCLVPLGC LSYVAGDGGG IWTPPGFNGG TSR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G27660.1 | 3e-52 | bHLH family protein |