PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023522021.1
Organism
Cucurbita pepo subsp. pepo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family bHLH
Protein Properties Length: 182aa    MW: 20376.7 Da    PI: 8.3802
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023522021.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH33.86.3e-11249454
                    HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
             HLH  4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54
                    ah ++Er+RR+++N+ +  Lr+l P     + k+ + a+i   ++e+Ik+L
  XP_023522021.1  2 AHIAVERNRRRQMNEHLRVLRTLTPCF---YIKRGDQASIIGGVIEFIKEL 49
                    8*************************9...9******************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 182 aa     Download sequence    
MAHIAVERNR RRQMNEHLRV LRTLTPCFYI KRGDQASIIG GVIEFIKELH QVLQSLESNK  60
RRRKSVSPSP SPRPLVAVAD GFENGVDVGA CCNSSVADVE AKISGSNVLL KIISRRIPGQ  120
LSKMISVLER LSFEVLHLNI SSMDDTVLYS FVVKIGLECQ LSLDELAFEV QQSFCSQLYL  180
CQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G06120.11e-77bHLH family protein