PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023522020.1
Organism
Cucurbita pepo subsp. pepo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family bHLH
Protein Properties Length: 329aa    MW: 36536.5 Da    PI: 5.6233
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023522020.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH56.35.8e-183786255
                    HHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
             HLH  2 rrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55
                    r +h+e E+rRR++iN++f+ Lr+l+P++    ++K +Ka+ L +++eYI+ Lq
  XP_023522020.1 37 RSKHSETEQRRRSKINERFQILRDLIPQN----DQKRDKASFLLEVIEYIQFLQ 86
                    899*************************9....9*******************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 329 aa     Download sequence    
MVKTSKSVQE RFEDDGNGEL GVKIEGKSGD SKASDHRSKH SETEQRRRSK INERFQILRD  60
LIPQNDQKRD KASFLLEVIE YIQFLQEKLN LYEGSCQGWS PEPSKLMPWN YRASENYVDH  120
SQVIKSGSSH ENAVFSQPML TNASNVMDAD LGPVAELNAV DHALVSASQE LPMTMRAQPV  180
VFDSVGRGSL STETLDEPAS GSENISSKTK TESFQGRTST STGFRNHAVS DREDLTMESE  240
LESISGAYSH GLLNTLTQAL QASGIDLSQT NISVKVDVGK RANRTMSMSE IFHQDDKKQS  300
MNNQVMAESL HGCFTENTEQ AHKKLRTGV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G69010.14e-54bHLH family protein