PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023522012.1

Organism

Cucurbita pepo subsp. pepo

Taxonomic ID

3664

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo

Family

bHLH

Protein Properties

Length: 330aa MW: 36664.6 Da PI: 5.8241

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023522012.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	56.3	5.8e-18	37	86	2	55
HHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 2 rrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 r +h+e E+rRR++iN++f+ Lr+l+P++ ++K +Ka+ L +++eYI+ Lq XP_023522012.1 37 RSKHSETEQRRRSKINERFQILRDLIPQN----DQKRDKASFLLEVIEYIQFLQ 86 899***********************9....9*****************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 330 aa Download sequence
MVKTSKSVQE RFEDDGNGEL GVKIEGKSGD SKASDHRSKH SETEQRRRSK INERFQILRD 60 LIPQNDQKRD KASFLLEVIE YIQFLQEKLN LYEGSCQGWS PEPSKLMPWK NYRASENYVD 120 HSQVIKSGSS HENAVFSQPM LTNASNVMDA DLGPVAELNA VDHALVSASQ ELPMTMRAQP 180 VVFDSVGRGS LSTETLDEPA SGSENISSKT KTESFQGRTS TSTGFRNHAV SDREDLTMES 240 ELESISGAYS HGLLNTLTQA LQASGIDLSQ TNISVKVDVG KRANRTMSMS EIFHQDDKKQ 300 SMNNQVMAES LHGCFTENTE QAHKKLRTGV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G69010.1	1e-54	bHLH family protein