PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_023521318.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
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Family | NAC | ||||||||
Protein Properties | Length: 271aa MW: 31371.2 Da PI: 7.5614 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 171.8 | 2.1e-53 | 8 | 136 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.k.kvka.eekewyfFskrdkkyatgkrknratksgyWkatgkdkev 92 +ppGfrFhPtdeelv +yL++k++++k++l +vi ++d+yk+ePwd++ + k+ e+kewyfFs++d+ky+tg+r+nrat++g+Wkatg+dk+v XP_023521318.1 8 VPPGFRFHPTDEELVGYYLERKINAQKIDL-DVIIDIDLYKMEPWDIEgNcKFGLeEQKEWYFFSHKDRKYPTGSRTNRATSAGFWKATGRDKAV 101 69****************************.99**************943433333677************************************ PP NAM 93 lskkgelvglkktLvfykgrapkgektdWvmheyrl 128 +s k++++g++ktLvfy grap+g+ktdW++heyrl XP_023521318.1 102 VS-KNRVIGMRKTLVFYIGRAPNGRKTDWIIHEYRL 136 **.8999***************************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 271 aa Download sequence |
MENLESCVPP GFRFHPTDEE LVGYYLERKI NAQKIDLDVI IDIDLYKMEP WDIEGNCKFG 60 LEEQKEWYFF SHKDRKYPTG SRTNRATSAG FWKATGRDKA VVSKNRVIGM RKTLVFYIGR 120 APNGRKTDWI IHEYRLQTSQ LAPTQEEGWV VCKAFKKPNP NQSQGIGGWN NNGYHNQNQG 180 YYDLKNNPQF VRSLAFSDGM TPTHMLNSSC LEYQHFVPNN NHSSCFDINQ LIQLPSLESP 240 MLSPSFDTNE TKRNHDVMSP SSSYPNFFPN Y |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G71930.1 | 6e-92 | NAC family protein |