PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_023520920.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
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Family | MYB | ||||||||
Protein Properties | Length: 305aa MW: 34618 Da PI: 5.2827 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 39.2 | 1.6e-12 | 12 | 57 | 1 | 46 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 +g+W eEde l++ vk++G+++W++I ++ + Rt+k+c++rw + XP_023520920.1 12 KGPWKLEEDEVLLNHVKRFGPRDWSSIRSKGLLQRTGKSCRLRWVN 57 79*************************8887799**********87 PP | |||||||
2 | Myb_DNA-binding | 45.4 | 1.8e-14 | 68 | 107 | 3 | 44 |
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrw 44 ++T+eE+ +++ +q+G++ W++Ia +++ gRt++++k++w XP_023520920.1 68 KFTAEEERVVIELQAQFGNK-WAKIATYLP-GRTDNDVKNFW 107 79******************.*********.*********** PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 305 aa Download sequence |
MEESGSQEAL RKGPWKLEED EVLLNHVKRF GPRDWSSIRS KGLLQRTGKS CRLRWVNKLR 60 PNLKNGCKFT AEEERVVIEL QAQFGNKWAK IATYLPGRTD NDVKNFWSSR QKRLARLLQN 120 STTPSKLQRS TRKEKPVDFD VPSMEAPKLS CASDGDASSR PMSCSSSFSA DNAEAVDMFC 180 SLPDLYRPKL LGFGQDFVQP EFNPFPITIK SDPQTNFHPL PLGSTFSSQG LLHDPNIDVF 240 LEPLDVSQLD NEVQFPFGLQ FYEPMGRCSS HDVVRENVEN PESFFNEFPA DILDQIELLP 300 SSPEN |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G60460.1 | 8e-75 | MYB family protein |