PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_023520613.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
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Family | bHLH | ||||||||
Protein Properties | Length: 222aa MW: 24855.3 Da PI: 8.6226 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 43.8 | 4.7e-14 | 55 | 101 | 3 | 54 |
HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 ++h+e+E+rRR+riNs +++Lr+llP + K +Ka+ L k+ve +k+L XP_023520613.1 55 KNHKEAEKRRRERINSHLDKLRTLLPCN-----SKTDKASLLAKVVERVKEL 101 58*************************8.....7*************99998 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 222 aa Download sequence |
MMQADESCEL YRFLAQNKGL RLRGASGSCS FPAGQSLSTE TALPSPHDRA LAALKNHKEA 60 EKRRRERINS HLDKLRTLLP CNSKTDKASL LAKVVERVKE LKHQTADIAE LETFPSESDE 120 ISVLSGEESD DGRLLFKASL CCEDRSDLIP ELNDILNSLQ LKTVRADIVT VGGRIRNVLL 180 IAANHHHSLE SLHFLQNALK SLLERSNCSD RSKRRRLVIA HK |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 213 | 217 | KRRRL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G41130.1 | 9e-69 | bHLH family protein |