PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023520553.1

Organism

Cucurbita pepo subsp. pepo

Taxonomic ID

3664

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo

Family

NAC

Protein Properties

Length: 381aa MW: 44001.4 Da PI: 6.7958

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023520553.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	164.7	3.2e-51	16	144	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvka...eekewyfFskrdkkyatgkrknratksgyWkatgkdkev 92 +ppGfrFhPt+eel+++yL+kkv+ +k++l +vi++vd++k+ePwd+++k+k +++wyfFs++dkky+tg+r+nrat+ g+Wkatg+dk + XP_023520553.1 16 VPPGFRFHPTEEELLHYYLRKKVAFQKIDL-DVIRDVDLNKLEPWDIQEKCKIgstPQNDWYFFSHKDKKYPTGTRTNRATAVGFWKATGRDKII 109 69**************************.9***********964444222455********************************** PP NAM 93 lskkgelvglkktLvfykgrapkgektdWvmheyrl 128 ++ +++ +gl+ktLvfykgrap+g+k+dW+mheyrl XP_023520553.1 110 YT-GSKRIGLRKTLVFYKGRAPHGQKSDWIMHEYRL 144 9.999***************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 381 aa Download sequence
MAEHDMTLSV NGHSQVPPGF RFHPTEEELL HYYLRKKVAF QKIDLDVIRD VDLNKLEPWD 60 IQEKCKIGST PQNDWYFFSH KDKKYPTGTR TNRATAVGFW KATGRDKIIY TGSKRIGLRK 120 TLVFYKGRAP HGQKSDWIMH EYRLDDCDRD NNICNSIGEP QVSEDGWVVC RIFKKKSYQK 180 CVDSPKASGS DSDVRLLNAN NDGVLDQILH YMGRTCKLEM ESFSNINYNN QSSRLILNSK 240 NNIEDQQQKV DKSFMHLPRL DSPTTVPSIV SHHQLETTPF DYNIIFNHEM LLEPTEPMPE 300 LVHDRPMVKL DNWVALDRLV ASQLNGHNER SIEDGEHEHE QQHHHMQVSS RGLGYGHEND 360 IWGFTKSASP SSLDPLSHFS V

Sequence ? help Back to Top

Protein Sequence Length: 381 aa Download sequence

MAEHDMTLSV NGHSQVPPGF RFHPTEEELL HYYLRKKVAF QKIDLDVIRD VDLNKLEPWD  60
IQEKCKIGST PQNDWYFFSH KDKKYPTGTR TNRATAVGFW KATGRDKIIY TGSKRIGLRK  120
TLVFYKGRAP HGQKSDWIMH EYRLDDCDRD NNICNSIGEP QVSEDGWVVC RIFKKKSYQK  180
CVDSPKASGS DSDVRLLNAN NDGVLDQILH YMGRTCKLEM ESFSNINYNN QSSRLILNSK  240
NNIEDQQQKV DKSFMHLPRL DSPTTVPSIV SHHQLETTPF DYNIIFNHEM LLEPTEPMPE  300
LVHDRPMVKL DNWVALDRLV ASQLNGHNER SIEDGEHEHE QQHHHMQVSS RGLGYGHEND  360
IWGFTKSASP SSLDPLSHFS V

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G32770.1	1e-114	NAC family protein