PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023520547.1
Organism
Cucurbita pepo subsp. pepo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family B3
Protein Properties Length: 322aa    MW: 36284.5 Da    PI: 6.7425
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023520547.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B396.91.3e-3054156197
                     EEEE-..-HHHHTT-EE--HHH.HTT....---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-.SS.SE CS
              B3   1 ffkvltpsdvlksgrlvlpkkfaeeh....ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkld.gr.se 89 
                     f kv tpsdv+k++rlv+pk++ae++    ++ + ++  l +ed++g+sW+++++y+++s++yv+tkGW++Fvk+++L++gD+v F++  g+  +
  XP_023520547.1  54 FNKVVTPSDVGKLNRLVIPKQHAERFfpldSSTNDKGLLLNFEDRNGKSWRFRYSYWNSSQSYVMTKGWSRFVKEKRLDAGDTVSFQRGvGEiGR 148
                     89***************************9555568889************************************************55466666 PP

                     E..EEEEE CS
              B3  90 felvvkvf 97 
                      +l++  +
  XP_023520547.1 149 DRLYIDCR 156
                     66666655 PP
Sequence ? help Back to Top
Protein Sequence    Length: 322 aa     Download sequence    
MNFGLNRHQN HHLEPRNRLD LTMLEPSEPE EEAASSTAVG SDGGDGGVEK EHMFNKVVTP  60
SDVGKLNRLV IPKQHAERFF PLDSSTNDKG LLLNFEDRNG KSWRFRYSYW NSSQSYVMTK  120
GWSRFVKEKR LDAGDTVSFQ RGVGEIGRDR LYIDCRRGHR HELPFHHHSP TTASIRPSIL  180
VPASATAWGP FVWQPLSATT PRYLPHLQDP TSNRECCPYP YRSVETSGMM FLRTEGRRVA  240
PRLGDQREVE VEVEVEPSGG DGGGGNSMTV VQDTPVKRSR LRLFGVNMEM EDPISLTSDE  300
CELLLFSSNS NPKLASSSSN YE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G46870.15e-63B3 family protein