PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023520428.1
Organism
Cucurbita pepo subsp. pepo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family bHLH
Protein Properties Length: 378aa    MW: 41603.8 Da    PI: 6.2469
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023520428.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH185.1e-062783161154
                     HHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
             HLH  11 rRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                      R +++ +++  L++l+ +      +K + a++L +A+eYIk L
  XP_023520428.1 278 VRKEKMGDRITALQQLVSPF-----GKTDTASVLSEAIEYIKFL 316
                     5778999**********998.....8****************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 378 aa     Download sequence    
MAEEFQSSGN WWEASRSRYE AGISPSSSAA AADPNLHITG LALDWNQPLL GGGEKAAEGS  60
FRSMMQPDNM NLNMLQETEQ QQQQQIEWMR SEKGINRGFS LDHHHQQFAS PSHYSSTDSA  120
VTSFPIDTTT AATTLYGNST TLLQGLLGGE QQQVSAAASM NYPYNSHYGI NSNEFMAAGA  180
SWSPSTKLPQ FLRNSTPHNQ LQFSNNTAFW NASDMKDVRP SYVPTSYNTI PEKSKNRSEI  240
GDSISVGKKS GNDGNQQQSG GGKRGRNESP STLPAFKVRK EKMGDRITAL QQLVSPFGKT  300
DTASVLSEAI EYIKFLHEQV GVLSTPYLKS RSDKWKEGEG EEDLRSRGLC LVPVSSTFPV  360
THDTTVDFWT PTFGGTFR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G20640.14e-61bHLH family protein