PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_023520185.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
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Family | HD-ZIP | ||||||||
Protein Properties | Length: 421aa MW: 47677.7 Da PI: 6.5981 | ||||||||
Description | HD-ZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 64.7 | 1.3e-20 | 26 | 80 | 2 | 56 |
T--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 2 rkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 + +++t++q+++Le++F+++++p++++r +L+++lgL rq+k+WFqNrR+++k XP_023520185.1 26 KCYHRHTANQIQRLEAMFKECPHPDEKQRLQLSRELGLAPRQIKFWFQNRRTQMK 80 667899**********************************************998 PP | |||||||
2 | START | 138.8 | 5.5e-44 | 223 | 416 | 2 | 176 |
HHHHHHHHHHHHHHHC-TT-EEEE....EXCCTTEEEEEEESSS.......SCEEEEEEEECCSCHHHHHHHHHCCCGGCT-TT-S....EEEEE CS START 2 laeeaaqelvkkalaeepgWvkss....esengdevlqkfeeskv......dsgealrasgvvdmvlallveellddkeqWdetla....kaetl 82 +a a++el+++ + +ep+W ks + ++ +++ q f++ ++ +++ea r+sgvv+m+++ lv ++d++ +W+e ++ a t+ XP_023520185.1 223 IATNAMAELLRLSQTNEPFWIKSTndgrDVLDLETYEQAFPRPNSpfknphFRTEATRDSGVVIMNSEALVDMFMDSN-KWTELFPtivsIARTI 316 77899*******************8888888888888888887779********************************.*******999999*** PP EEECTT......EEEEEEEEXXTTXX-SSX.EEEEEEEEEEE.TTS-EEEEEEEEE-TTS--.-TTSEE-EESSEEEEEEEECTCEEEEEEEE-E CS START 83 evissg......galqlmvaelqalsplvp.RdfvfvRyirqlgagdwvivdvSvdseqkppesssvvRaellpSgiliepksnghskvtwvehv 170 evissg g lqlm++elq+lsplv+ R f+++R+++q + g+w++vdvS + +++++ s +++lpSg+li++++ng+skvtw+ehv XP_023520185.1 317 EVISSGllgtqnGSLQLMYQELQLLSPLVStRHFYILRFCQQIEHGTWAVVDVSYNIPRENQI-VSHSQCHRLPSGCLIQDMPNGYSKVTWIEHV 410 *************************************************************95.778889************************* PP E--SSX CS START 171 dlkgrl 176 ++++r XP_023520185.1 411 EVEDRG 416 **9875 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 421 aa Download sequence |
MEFGTGGGGG SGWDNDSSSD PQRRKKCYHR HTANQIQRLE AMFKECPHPD EKQRLQLSRE 60 LGLAPRQIKF WFQNRRTQMK AQHERADNSA LRAENDKIRC ENIAIREALK NVICPSCGGP 120 PLQDPYFDEH KLRIENAHLK EELDRVSSIA AKFIGRPISQ LPPIHPPHFS SLELSMASFP 180 SQEIGCPSLD LDLLPASSTS VPTLPYHHPI HLSAVDKSLM TEIATNAMAE LLRLSQTNEP 240 FWIKSTNDGR DVLDLETYEQ AFPRPNSPFK NPHFRTEATR DSGVVIMNSE ALVDMFMDSN 300 KWTELFPTIV SIARTIEVIS SGLLGTQNGS LQLMYQELQL LSPLVSTRHF YILRFCQQIE 360 HGTWAVVDVS YNIPRENQIV SHSQCHRLPS GCLIQDMPNG YSKVTWIEHV EVEDRGSSHX 420 G |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G73360.1 | 1e-180 | HD-ZIP family protein |