PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023520182.1

Organism

Cucurbita pepo subsp. pepo

Taxonomic ID

3664

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo

Family

TCP

Protein Properties

Length: 265aa MW: 27137.3 Da PI: 10.2143

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023520182.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	118.7	7e-37	34	119	3	80
TCP 3 gkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssasec........eaessss 80 kk + +++h+kv+gR+RR+R+++ caar+F+L++eLG+++d++tieWLl+qa+p+i+++tgt++++as++ ++++ ss XP_023520182.1 34 LKKPPAKDRHSKVDGRGRRIRMPIICAARVFQLTRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPASFSticaslrgTPAALSS 119 699************************************************************99999766444444443333333 PP

Sequence ? help Back to Top
Protein Sequence Length: 265 aa Download sequence
MSGSDGVVTH NNGAIIPHSQ QSTQTTTNNG ALPLKKPPAK DRHSKVDGRG RRIRMPIICA 60 ARVFQLTREL GHKSDGQTIE WLLRQAEPSI IAATGTGTTP ASFSTICASL RGTPAALSSS 120 ASLDHKPLLP PAPFILGKRV RPDDDAGHKD NDGNGGGGGG NGGGGAISVG PSVGSIMGSA 180 AAGGYWAFPA RPDFGQVWSF AAAAAPEMVI QPTAISHQAS LFAQQQSIGE ASAAKVGNYL 240 PGHLNLLASL SGGQGSSGRR DNDHR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G23280.1	3e-67	TCP family protein