PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_023520149.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
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Family | MYB | ||||||||
Protein Properties | Length: 284aa MW: 32432.9 Da PI: 5.3678 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 48.2 | 2.5e-15 | 23 | 70 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+WT eEd ll+ + + g+W++ a++ g++Rt+k+c++rw++yl XP_023520149.1 23 RGPWTVEEDNLLITSISIHSEGRWNLLAKRSGLRRTGKSCRLRWLNYL 70 89********************************************97 PP | |||||||
2 | Myb_DNA-binding | 52.2 | 1.4e-16 | 76 | 119 | 1 | 46 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 rg+ +++E++l++d++ ++G++ W++Ia++++ gRt++++k++w++ XP_023520149.1 76 RGNLSPQEQLLILDLHSKWGNR-WSKIAQHLP-GRTDNEIKNYWRT 119 7899******************.*********.***********96 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 284 aa Download sequence |
MSSCSEIEDE NNNNNNEEEE LRRGPWTVEE DNLLITSISI HSEGRWNLLA KRSGLRRTGK 60 SCRLRWLNYL KPDVKRGNLS PQEQLLILDL HSKWGNRWSK IAQHLPGRTD NEIKNYWRTR 120 VQKQARHLNM DTDSDAFQQI IRYYWMPRLI QKINQSSPLP PQPPPPPPSE LPGTSQAEMV 180 SQSSYGFEAP ATATPLQIGG DLMGSSCNSS SSSSSGFQNY ENYGSFVNDY WDEEHGKGEM 240 MNWATTAVTG DSGYPVAHCH MAETNWTHTD FTGYVPSMDE LWQF |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G25340.1 | 2e-73 | MYB family protein |