PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023520007.1

Organism

Cucurbita pepo subsp. pepo

Taxonomic ID

3664

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo

Family

NAC

Protein Properties

Length: 348aa MW: 38378.4 Da PI: 8.995

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023520007.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	169.9	8.1e-53	22	149	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk 95 lppGfrFhPtdeelvv+yLk+k+++++l++ +i+e+d+yk++PwdLp+k+ +++ewyfF++r++ky++g r+nra+ sgyWkatg+dk+++++ XP_023520007.1 22 LPPGFRFHPTDEELVVHYLKRKLSSSPLPA-PIIAELDLYKFDPWDLPSKAVFGKNEWYFFTPRERKYPNGARPNRAAISGYWKATGTDKPIMTS 115 79*************************9.88***********77778999*********************************99 PP NAM 96 .kgelvglkktLvfykgrapkgektdWvmheyrl 128 ++++vg+kk Lvfy gr pkg kt+W+mheyrl XP_023520007.1 116 nGTQKVGVKKALVFYGGRPPKGIKTNWIMHEYRL 149 67788*************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 348 aa Download sequence
MMDPDYMEST DSSSNTSAHL QLPPGFRFHP TDEELVVHYL KRKLSSSPLP APIIAELDLY 60 KFDPWDLPSK AVFGKNEWYF FTPRERKYPN GARPNRAAIS GYWKATGTDK PIMTSNGTQK 120 VGVKKALVFY GGRPPKGIKT NWIMHEYRLL HVANTNLKPL DAYPTNRKPS LKLDDWVLCR 180 IYMKNAAQAS TIIEREMEEL SRAAAAAAAR LPKLVVGGGQ KGGRNCYLDV VALSSEGDEI 240 INHQTNSNIS ELPSSSCSSK RGLTCQIWSG GATASNDGGK PLRLDLMNSY SGGVTPGTEE 300 NTVSYVSLLN QLSVQNAAFQ TSEPFIGSLS DGVLRQQFQL PSNINWNS

Sequence ? help Back to Top

Protein Sequence Length: 348 aa Download sequence

MMDPDYMEST DSSSNTSAHL QLPPGFRFHP TDEELVVHYL KRKLSSSPLP APIIAELDLY  60
KFDPWDLPSK AVFGKNEWYF FTPRERKYPN GARPNRAAIS GYWKATGTDK PIMTSNGTQK  120
VGVKKALVFY GGRPPKGIKT NWIMHEYRLL HVANTNLKPL DAYPTNRKPS LKLDDWVLCR  180
IYMKNAAQAS TIIEREMEEL SRAAAAAAAR LPKLVVGGGQ KGGRNCYLDV VALSSEGDEI  240
INHQTNSNIS ELPSSSCSSK RGLTCQIWSG GATASNDGGK PLRLDLMNSY SGGVTPGTEE  300
NTVSYVSLLN QLSVQNAAFQ TSEPFIGSLS DGVLRQQFQL PSNINWNS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G61110.1	3e-94	NAC family protein