PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_023519815.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
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Family | MYB_related | ||||||||
Protein Properties | Length: 517aa MW: 57636.3 Da PI: 7.3617 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 23.9 | 9.5e-08 | 395 | 443 | 3 | 48 |
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHT...TTS-HHHHHHHHHHHT CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmg...kgRtlkqcksrwqkyl 48 +WT E +l+++v ++G g+W+ I r +Rt ++k++w+++l XP_023519815.1 395 SWTLSEVMKLIEGVSEYGVGRWTEIKRLQFsssSHRTSVDLKDKWRNLL 443 5************************876558999*************96 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 517 aa Download sequence |
MSAASKETMM TSNQATKMFT YEFPDVDSDL SIFPVPEDDV LGVEHFLEPE INKCFSGSVL 60 DFNTFHSHKC LGIEHFSFAV DFDHIKIDSE SLHSSLTLEG ERTKQEDHDG KLHGADDVCS 120 GSNKLLGTAN SRTTDDIFNL APGSSNASFL GNVDFGSYSQ GFCTTDIGVD LSFTGGHNVA 180 FDQKEGKLMI SSSTGSSGCS GSATACLDDE NMSDNRPVKR KRLSSCSSSK TNSEHNESRI 240 VLFNEGSRGD TLVTEKRLRK PPRRYSEESV EQKSRSNSKK SAPRASKDKS RHSESHKQQW 300 QKKLKAAPVV YKDKSFNGGC IQVPFGLPIE ESHSAKKIIC WEPEEIKENR ILCIKDKNDV 360 ESFSAESEDE NTEDECATKV YNAQKGNSRR KHHISWTLSE VMKLIEGVSE YGVGRWTEIK 420 RLQFSSSSHR TSVDLKDKWR NLLKASDTQL QNRRKVVVGR KQTSQQVPES VLCRVRELAA 480 IYPYPRENKS KNLCSAPSSS SFKSTANNML ISLPTVM |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G72650.2 | 3e-31 | MYB_related family protein |