PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023519814.1

Organism

Cucurbita pepo subsp. pepo

Taxonomic ID

3664

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo

Family

MYB_related

Protein Properties

Length: 518aa MW: 57764.4 Da PI: 7.3617

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023519814.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	23.9	9.6e-08	395	443	3	48
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHT...TTS-HHHHHHHHHHHT CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmg...kgRtlkqcksrwqkyl 48 +WT E +l+++v ++G g+W+ I r +Rt ++k++w+++l XP_023519814.1 395 SWTLSEVMKLIEGVSEYGVGRWTEIKRLQFsssSHRTSVDLKDKWRNLL 443 5**********************876558999***********96 PP

Sequence ? help Back to Top
Protein Sequence Length: 518 aa Download sequence
MSAASKETMM TSNQATKMFT YEFPDVDSDL SIFPVPEDDV LGVEHFLEPE INKCFSGSVL 60 DFNTFHSHKC LGIEHFSFAV DFDHIKIDSE SLHSSLTLEG ERTKQEDHDG KLHGADDVCS 120 GSNKLLGTAN SRTTDDIFNL APGSSNASFL GNVDFGSYSQ GFCTTDIGVD LSFTGGHNVA 180 FDQKEGKLMI SSSTGSSGCS GSATACLDDE NMSDNRPVKR KRLSSCSSSK TNSEHNESRI 240 VLFNEGSRGD TLVTEKRLRK PPRRYSEESV EQKSRSNSKK SAPRASKDKS RHSESHKQQW 300 QKKLKAAPVV YKDKSFNGGC IQVPFGLPIE ESHSAKKIIC WEPEEIKENR ILCIKDKNDV 360 ESFSAESEDE NTEDECATKV YNAQKGNSRR KHHISWTLSE VMKLIEGVSE YGVGRWTEIK 420 RLQFSSSSHR TSVDLKDKWR NLLKASDTQL QNRRKQVVVG RKQTSQQVPE SVLCRVRELA 480 AIYPYPRENK SKNLCSAPSS SSFKSTANNM LISLPTVM

Sequence ? help Back to Top

Protein Sequence Length: 518 aa Download sequence

MSAASKETMM TSNQATKMFT YEFPDVDSDL SIFPVPEDDV LGVEHFLEPE INKCFSGSVL  60
DFNTFHSHKC LGIEHFSFAV DFDHIKIDSE SLHSSLTLEG ERTKQEDHDG KLHGADDVCS  120
GSNKLLGTAN SRTTDDIFNL APGSSNASFL GNVDFGSYSQ GFCTTDIGVD LSFTGGHNVA  180
FDQKEGKLMI SSSTGSSGCS GSATACLDDE NMSDNRPVKR KRLSSCSSSK TNSEHNESRI  240
VLFNEGSRGD TLVTEKRLRK PPRRYSEESV EQKSRSNSKK SAPRASKDKS RHSESHKQQW  300
QKKLKAAPVV YKDKSFNGGC IQVPFGLPIE ESHSAKKIIC WEPEEIKENR ILCIKDKNDV  360
ESFSAESEDE NTEDECATKV YNAQKGNSRR KHHISWTLSE VMKLIEGVSE YGVGRWTEIK  420
RLQFSSSSHR TSVDLKDKWR NLLKASDTQL QNRRKQVVVG RKQTSQQVPE SVLCRVRELA  480
AIYPYPRENK SKNLCSAPSS SSFKSTANNM LISLPTVM

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G72650.1	3e-31	MYB_related family protein