PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023519773.1
Organism
Cucurbita pepo subsp. pepo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family NAC
Protein Properties Length: 309aa    MW: 34577.9 Da    PI: 8.4832
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023519773.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM107.91.2e-33511911128
             NAM   1 lppGfrFhPtdeelvveyLkkkvegkk......leleev.ikev.diykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratk......sg 81 
                     lp+G++F+Ptd+e++ e+L++k+ +++      ++++   ++   +i++++P++Lp  v+++ +  +fF++ +k+y+tg+rk+r+++      + 
  XP_023519773.1  51 LPAGVKFDPTDQEIL-EHLEAKAISDSrklhplIDEFIPtLEGEnGICYTHPQKLP-GVRKDGQIRHFFHRPSKAYTTGTRKRRKVHtdeegnET 143
                     799***********9.889998776664665442222222333336**********.666677788******************74434555578 PP

             NAM  82 yWkatgkdkevlskkgelvglkktLvfy..kgrapkgektdWvmheyrl 128
                     +W++tgk+++vl+ +g+++g kk+Lv+y   gr++k+ekt+Wvmh+y+l
  XP_023519773.1 144 RWHKTGKTRPVLV-GGAVKGFKKILVLYtnYGRQRKPEKTNWVMHQYHL 191
                     8************.9*************66589**************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 309 aa     Download sequence    
MSWCSGSDDD ESSASLHQLA SVVLPAPLRC PSCGHPIQLQ DQAGIHDLPG LPAGVKFDPT  60
DQEILEHLEA KAISDSRKLH PLIDEFIPTL EGENGICYTH PQKLPGVRKD GQIRHFFHRP  120
SKAYTTGTRK RRKVHTDEEG NETRWHKTGK TRPVLVGGAV KGFKKILVLY TNYGRQRKPE  180
KTNWVMHQYH LGNNEEEKDG EVVVSKVFYQ TQPRQCSSTT TNNALLQSEI KFKTAAAAAV  240
TNHHHHPDPS PATLVDYYNA ASTNFISFDQ HSESPIPQLL PNLVRTGDGS SFIRFPPPDT  300
TTRKPDRKL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G28500.11e-120NAC family protein