PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023519320.1

Organism

Cucurbita pepo subsp. pepo

Taxonomic ID

3664

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo

Family

FAR1

Protein Properties

Length: 797aa MW: 91938.5 Da PI: 8.4101

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023519320.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	77.8	2e-24	97	204	2	91
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk..................tekerrtraetrtgCkaklkvkkekdgkwev 78 fY+eYAk+ GF v +++s++s+ +g++++++f C+k+g ++e+ +++ r++r+ ++t+Cka+++vk+ ++gkw + XP_023519320.1 97 FYKEYAKSFGFCVIIKASRRSRISGKFIDAKFACTKYGDKRESGVVevsdpvtnsnngigvhgkKKRGRTNRSWEKTDCKACMHVKRLQSGKWAI 191 *************************************9999877899*********99899999********************* PP FAR1 79 tkleleHnHelap 91 +++ +eHnHe++p XP_023519320.1 192 HSFIKEHNHEVFP 204 ********875 PP

Sequence ? help Back to Top
Protein Sequence Length: 797 aa Download sequence
MFLYRSRTAV RATKETITGL NMEDNSVHCG KEMCTRDGTD GSSHMVGKEN TGPTVNMDMP 60 KYRNIEYSQN VLNLKSFKIV EPREGMEFES KENAFTFYKE YAKSFGFCVI IKASRRSRIS 120 GKFIDAKFAC TKYGDKRESG VVEVSDPVTN SNNGIGVHGK KKRGRTNRSW EKTDCKACMH 180 VKRLQSGKWA IHSFIKEHNH EVFPDESYYF RGHGNLEVGS SNTDVLHSNR ARRKSKLCMK 240 SKLSGGCTIA KKQNVAAIDQ VCKARRLAID EGDVQVMLDH FVCMQDENPN FFYSIDLNEK 300 QCLRNVFWVD AKGRLDYANF ADVVFFDTTY IKNEYRLSFA PFIGVNHHCQ FVLLGCSLVA 360 DETKSTYAWL MRAWLRAMHK CPPKVILTVQ DEALKEAIAE ELPNSFHCYC LWDIYSKIPE 420 KLSHVMRQRE NFLSMFDECV FKSWTIEEFE KRWLRIVDRF ELSHDSWFKS LYADRNRWIP 480 ACMKNIFLAG MYTRHRPEGI NSFLDKYIQR KTSLREFLDH YRTFARDKFE EEGKADLETL 540 HKQPGLKSPS PFGKQMAGLY THAVFKKFQV EVLGVVACHP RKISEDGVIK VFRVQDFENN 600 QDFLVEWNEA TSDISCLCRS FEFNGYLCRH VMIVLQISGI HSIPSQYVLT RWTRDAKSRQ 660 QTRKGSHVES RVQRYIDLCQ QAFRLSNEGS LSHESYNVAF DALEEALRKC ESLNVSIQPS 720 VVAHSSSSHE SEEVNQGKNT NKDNKKNTTN VSRQDCFEPE INTVKIHDGW QQLAPALHYP 780 DEQGGSQGVV RLTLDAL

Sequence ? help Back to Top

Protein Sequence Length: 797 aa Download sequence

MFLYRSRTAV RATKETITGL NMEDNSVHCG KEMCTRDGTD GSSHMVGKEN TGPTVNMDMP  60
KYRNIEYSQN VLNLKSFKIV EPREGMEFES KENAFTFYKE YAKSFGFCVI IKASRRSRIS  120
GKFIDAKFAC TKYGDKRESG VVEVSDPVTN SNNGIGVHGK KKRGRTNRSW EKTDCKACMH  180
VKRLQSGKWA IHSFIKEHNH EVFPDESYYF RGHGNLEVGS SNTDVLHSNR ARRKSKLCMK  240
SKLSGGCTIA KKQNVAAIDQ VCKARRLAID EGDVQVMLDH FVCMQDENPN FFYSIDLNEK  300
QCLRNVFWVD AKGRLDYANF ADVVFFDTTY IKNEYRLSFA PFIGVNHHCQ FVLLGCSLVA  360
DETKSTYAWL MRAWLRAMHK CPPKVILTVQ DEALKEAIAE ELPNSFHCYC LWDIYSKIPE  420
KLSHVMRQRE NFLSMFDECV FKSWTIEEFE KRWLRIVDRF ELSHDSWFKS LYADRNRWIP  480
ACMKNIFLAG MYTRHRPEGI NSFLDKYIQR KTSLREFLDH YRTFARDKFE EEGKADLETL  540
HKQPGLKSPS PFGKQMAGLY THAVFKKFQV EVLGVVACHP RKISEDGVIK VFRVQDFENN  600
QDFLVEWNEA TSDISCLCRS FEFNGYLCRH VMIVLQISGI HSIPSQYVLT RWTRDAKSRQ  660
QTRKGSHVES RVQRYIDLCQ QAFRLSNEGS LSHESYNVAF DALEEALRKC ESLNVSIQPS  720
VVAHSSSSHE SEEVNQGKNT NKDNKKNTTN VSRQDCFEPE INTVKIHDGW QQLAPALHYP  780
DEQGGSQGVV RLTLDAL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G15090.1	0.0	FAR1 family protein