PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023518637.1

Organism

Cucurbita pepo subsp. pepo

Taxonomic ID

3664

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo

Family

TALE

Protein Properties

Length: 359aa MW: 40168.2 Da PI: 6.6606

Description

TALE family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023518637.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	29.2	1.6e-09	288	321	22	55
SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHH CS Homeobox 22 nrypsaeereeLAkklgLterqVkvWFqNrRake 55 +yps++++ LA+++gL+++q+ +WF N+R ++ XP_023518637.1 288 WPYPSESQKLALAQSTGLDQKQINNWFINQRKRH 321 69*****************************885 PP
2	ELK	41.2	3.6e-14	241	262	1	22
ELK 1 ELKhqLlrKYsgyLgsLkqEFs 22 ELK qLlrKYsg+LgsLkqEF+ XP_023518637.1 241 ELKGQLLRKYSGCLGSLKQEFM 262 9********************8 PP

Sequence ? help Back to Top
Protein Sequence Length: 359 aa Download sequence
MDGPGGSSSG MMNFGDQNNS NNGLCSSMMM MMPLMSSHHH HHQGDACNPF PPLPSPNYTT 60 NNINNTNTSS SSNPICYFMD EHTTTTTTTN NNDHGCCNAN SSSCELKAKI MGHPHYHRLL 120 AAYVNCRKVG APPDVVARLE GACASALTMS GTSCTGCIGE DPALDQFMEA YCEMLTKYEQ 180 ELSKPFRDAM LFLHRIECQF KALSISSSDA VCGEAFERNG SSEEEVDING HSIDPQAEDR 240 ELKGQLLRKY SGCLGSLKQE FMKKRKKGKL PKEARQQLLD WWSRHYKWPY PSESQKLALA 300 QSTGLDQKQI NNWFINQRKR HWKPSEDMQF VVMDGGHPQY YMDTVLGNPF PLDISPTLL

Sequence ? help Back to Top

Protein Sequence Length: 359 aa Download sequence

MDGPGGSSSG MMNFGDQNNS NNGLCSSMMM MMPLMSSHHH HHQGDACNPF PPLPSPNYTT  60
NNINNTNTSS SSNPICYFMD EHTTTTTTTN NNDHGCCNAN SSSCELKAKI MGHPHYHRLL  120
AAYVNCRKVG APPDVVARLE GACASALTMS GTSCTGCIGE DPALDQFMEA YCEMLTKYEQ  180
ELSKPFRDAM LFLHRIECQF KALSISSSDA VCGEAFERNG SSEEEVDING HSIDPQAEDR  240
ELKGQLLRKY SGCLGSLKQE FMKKRKKGKL PKEARQQLLD WWSRHYKWPY PSESQKLALA  300
QSTGLDQKQI NNWFINQRKR HWKPSEDMQF VVMDGGHPQY YMDTVLGNPF PLDISPTLL

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	257	266	LKQEFMKKRK
2	263	267	KKRKK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G62360.1	1e-131	TALE family protein