PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023518478.1

Organism

Cucurbita pepo subsp. pepo

Taxonomic ID

3664

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo

Family

Protein Properties

Length: 402aa MW: 45466.7 Da PI: 6.6894

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023518478.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	60	4.2e-19	167	263	2	96
EEE-..-HHHHTT-EE--HHH.HTT..---..--SEEEEEE.TTS-EEEEEE....EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE. CS B3 2 fkvltpsdvlksgrlvlpkkfaeeh..ggkkeesktltled.esgrsWevkliy..rkksgryvltkGWkeFvkangLkegDfvvFkldgrsefe 91 +k+l++sdv+++gr+vlpk+ aee+ ++ +e++++ ++d s+++W +k++y +++s++yvl+ + +Fvk+ngL gD ++++ +++++ XP_023518478.1 167 KKELKNSDVGSLGRIVLPKREAEENlpFLSDKEGMQILIRDvNSNKKWAMKYKYwaNNRSRMYVLE-STGDFVKQNGLMMGDLITLYE--DDSKN 258 6899*********************555568899*7888****9888888889999.9*****************3..34444 PP .EEEE CS B3 92 lvvkv 96 ++v++ XP_023518478.1 259 FYVTI 263 47765 PP

Sequence ? help Back to Top
Protein Sequence Length: 402 aa Download sequence
MDDDDEDHRR RRRDHRHNLN LPPFPPTSPL SPPPPPPQNS PVPILPHPPL GFSLRTPQSY 60 FVPPSLISYG FPIGNDPINP LLPKDDGRRG LDAWTTKVAR SKRRLARQRS LSVAKPPSSS 120 SSSSGLAGSS DHHSKRITVT PSQPNRTHNL NLSTLSTPDK VLRILLKKEL KNSDVGSLGR 180 IVLPKREAEE NLPFLSDKEG MQILIRDVNS NKKWAMKYKY WANNRSRMYV LESTGDFVKQ 240 NGLMMGDLIT LYEDDSKNFY VTIDKGEKHL IRDENEEKRK EAAAAAATAS AYPNMNIKDE 300 EEDDNLALLI EQLKHRSEDD ELPQSPCATS LLRSRSYFER GSYTGTEKGN DNNNNHNDNN 360 DNNDNNGKEV EGFEDCFGDL EILPEVSGFK FPILDYLRND RI

Sequence ? help Back to Top

Protein Sequence Length: 402 aa Download sequence

MDDDDEDHRR RRRDHRHNLN LPPFPPTSPL SPPPPPPQNS PVPILPHPPL GFSLRTPQSY  60
FVPPSLISYG FPIGNDPINP LLPKDDGRRG LDAWTTKVAR SKRRLARQRS LSVAKPPSSS  120
SSSSGLAGSS DHHSKRITVT PSQPNRTHNL NLSTLSTPDK VLRILLKKEL KNSDVGSLGR  180
IVLPKREAEE NLPFLSDKEG MQILIRDVNS NKKWAMKYKY WANNRSRMYV LESTGDFVKQ  240
NGLMMGDLIT LYEDDSKNFY VTIDKGEKHL IRDENEEKRK EAAAAAATAS AYPNMNIKDE  300
EEDDNLALLI EQLKHRSEDD ELPQSPCATS LLRSRSYFER GSYTGTEKGN DNNNNHNDNN  360
DNNDNNGKEV EGFEDCFGDL EILPEVSGFK FPILDYLRND RI

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G28300.1	1e-44	B3 family protein