PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023518465.1

Organism

Cucurbita pepo subsp. pepo

Taxonomic ID

3664

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo

Family

TALE

Protein Properties

Length: 452aa MW: 50343.2 Da PI: 6.8738

Description

TALE family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023518465.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	28.5	2.6e-09	285	322	19	54
HHH..SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS Homeobox 19 Fek..nrypsaeereeLAkklgLterqVkvWFqNrRak 54 Fe ++yp+ +++ LA+++gL+ +qV++WF N R + XP_023518465.1 285 FEHflHPYPTDTDKLMLASQTGLSRSQVSNWFINARVR 322 564459******************************88 PP
2	BELL	87.1	2e-28	165	233	4	72
BELL 4 elqkkkakLlslleeVdkrYkqyveqlqtvissFeavaglgsakpYtslAlkaiSrhFrcLkdaiaeqi 72 + ++kk++L+++l+eV+krYk y++q+q+v+ Fe +aglg+a+pY +lA a+ +hF+ Lk+ ia+q+ XP_023518465.1 165 DSRRKKSRLVTMLDEVYKRYKLYYQQMQAVVTTFEYAAGLGNAAPYMNLAVTAMFKHFKFLKNTIADQL 233 6789**************************************************************997 PP

Sequence ? help Back to Top
Protein Sequence Length: 452 aa Download sequence
MAEEGFEVYH VPHQSCRDKL RVGIANNNHN SHIAAALLPL YHPPSLISSH FDSHPLPQNP 60 SFHYPPPPPP PTAAATSAHV PPLLPDQPLS LDLNLQQRYA SALPFVGYSA SLLKASKFLK 120 PAQQLLHDLF DNSPPDPLLL DPLLESLAGD IPDPITSTDD DGGADSRRKK SRLVTMLDEV 180 YKRYKLYYQQ MQAVVTTFEY AAGLGNAAPY MNLAVTAMFK HFKFLKNTIA DQLQFNKKNQ 240 QPYNPYCQTS IHNNNNAPFV NHQPVWRPQR GLPESAVTVL RAWLFEHFLH PYPTDTDKLM 300 LASQTGLSRS QVSNWFINAR VRLWKPMVEE IHMLETRQAR KSHQNNDNDD NNDNNDHISS 360 HNGNNNNASS SHQDHNQLNL SNSNFIPTHH PHVAAGAAHM GGGGGGGNVS LTLGLHQNYG 420 GITLTEPFPI NAAQHFNFGL EGNGEGFVNE WF

Sequence ? help Back to Top

Protein Sequence Length: 452 aa Download sequence

MAEEGFEVYH VPHQSCRDKL RVGIANNNHN SHIAAALLPL YHPPSLISSH FDSHPLPQNP  60
SFHYPPPPPP PTAAATSAHV PPLLPDQPLS LDLNLQQRYA SALPFVGYSA SLLKASKFLK  120
PAQQLLHDLF DNSPPDPLLL DPLLESLAGD IPDPITSTDD DGGADSRRKK SRLVTMLDEV  180
YKRYKLYYQQ MQAVVTTFEY AAGLGNAAPY MNLAVTAMFK HFKFLKNTIA DQLQFNKKNQ  240
QPYNPYCQTS IHNNNNAPFV NHQPVWRPQR GLPESAVTVL RAWLFEHFLH PYPTDTDKLM  300
LASQTGLSRS QVSNWFINAR VRLWKPMVEE IHMLETRQAR KSHQNNDNDD NNDNNDHISS  360
HNGNNNNASS SHQDHNQLNL SNSNFIPTHH PHVAAGAAHM GGGGGGGNVS LTLGLHQNYG  420
GITLTEPFPI NAAQHFNFGL EGNGEGFVNE WF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G02030.1	3e-75	TALE family protein