PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_023518217.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
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Family | HD-ZIP | ||||||||
Protein Properties | Length: 328aa MW: 36931 Da PI: 4.5695 | ||||||||
Description | HD-ZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 59.5 | 5.5e-19 | 61 | 111 | 6 | 56 |
S--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 6 tftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 ++ +q+++Le+ Fe ++++ e++ +LA++lgL+ rqV vWFqNrRa++k XP_023518217.1 61 RLGVDQVKVLEKTFEIENKLEPERKVKLAQELGLQPRQVAVWFQNRRARWK 111 56779*********************************************9 PP | |||||||
2 | HD-ZIP_I/II | 130.3 | 7.9e-42 | 58 | 149 | 2 | 93 |
HD-ZIP_I/II 2 kkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreelke 93 kkrrl +qvk+LE++Fe e+kLeperKv+la+eLglqprqvavWFqnrRAR+ktkqlE+dy +Lk++yd+lk++ ++L++++++L +++ke XP_023518217.1 58 KKRRLGVDQVKVLEKTFEIENKLEPERKVKLAQELGLQPRQVAVWFQNRRARWKTKQLERDYGVLKANYDTLKRSFDTLQQDNDALLKQIKE 149 9****************************************************************************************987 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 328 aa Download sequence |
MKRHGSSDSL GALMSVCPTS EEQSPRNRHV YGMEFQSMLE GLDEEEGSME EHCHLGGKKR 60 RLGVDQVKVL EKTFEIENKL EPERKVKLAQ ELGLQPRQVA VWFQNRRARW KTKQLERDYG 120 VLKANYDTLK RSFDTLQQDN DALLKQIKEL KSKIQEEKTE SNLSVKEEIF ALESDTFLIE 180 QTNNSLPVDL ISLPAASDQS DDFNYESFKS AAVATDVDGG NQRVEVSLFP DFKDGSSDSD 240 SSAILNEDNS PNAVVSSAAA GILQSHHQIL SSPASSLNCF PFQKAAYNNA QPFVKIEEHN 300 FFSGEETCNL FSDEQAPSLQ WCIPDQWN |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 58 | 87 | KKRRLGVDQVKVLEKTFEIENKLEPERKVK |
2 | 106 | 114 | RRARWKTKQ |
3 | 127 | 132 | DTLKRS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G22430.1 | 6e-71 | HD-ZIP family protein |