PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023517653.1

Organism

Cucurbita pepo subsp. pepo

Taxonomic ID

3664

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo

Family

NAC

Protein Properties

Length: 282aa MW: 31467.3 Da PI: 9.268

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023517653.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	102.9	4.1e-32	41	183	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkk...lelee.vikevd....iykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratk......sg 81 lp+G++F+P+d++++ e+L +kv+++k ++l + +i+++d i++++P++Lp ++++ + +fF++ +k+y+ g+rk+r+++ + XP_023517653.1 41 LPAGVKFDPSDQQIL-EHLDAKVKRDKrklHPLLDeFIPTLDgedgICYTHPQNLP-GMRKDGEIRHFFHRPSKAYTAGSRKRRKVQtdkegtDT 133 799********99.99**9996663332224666555556******.566666777**************74444544467 PP NAM 82 yWkatgkdkevlsk.kgelvglkktLvfy..kgrapkgektdWvmheyrl 128 +W++tgk+++++ + +g ++g kk+Lv+y g+++k++kt+W+mh+y+l XP_023517653.1 134 RWHKTGKTRAITGAdGGVVMGFKKILVLYsnYGSERKPQKTNWIMHQYHL 183 7*******98677889*****65579999*********98 PP

Sequence ? help Back to Top
Protein Sequence Length: 282 aa Download sequence
MNWLNPNEGG LRDAFPSIIC PSCAHPIRFQ RQGGFEGWGR LPAGVKFDPS DQQILEHLDA 60 KVKRDKRKLH PLLDEFIPTL DGEDGICYTH PQNLPGMRKD GEIRHFFHRP SKAYTAGSRK 120 RRKVQTDKEG TDTRWHKTGK TRAITGADGG VVMGFKKILV LYSNYGSERK PQKTNWIMHQ 180 YHLGVTEHEK DGQLVASKVF FQKQPRQSSS SHQNSIVKQW GGGDGGYSPD TSAVFVDYGN 240 PMMSSLYEIG GGEKVHREFD FGEGEGEASS SVVVSGAHSN PL

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	62	69	VKRDKRKL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G28470.1	2e-94	NAC family protein