PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_023517416.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
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Family | C3H | ||||||||
Protein Properties | Length: 771aa MW: 84885.5 Da PI: 6.9162 | ||||||||
Description | C3H family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-CCCH | 22 | 2.8e-07 | 223 | 243 | 4 | 25 |
---SGGGGTS--TTTTT-SS-S CS zf-CCCH 4 elCrffartGtCkyGdrCkFaH 25 ++C+f+a+ G+C G++C+F H XP_023517416.1 223 AICDFYAK-GWCIKGSSCSFLH 243 68******.************* PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 771 aa Download sequence |
MRGIFVELGS RGYAQVPRKN VYLVDVCNDM DAKRHDKHLR SDTITTTESS EVKKLSSVGG 60 TESNGNIEFA RLSGEPLTKL VEQSHGECTK VESRKCPKDK ETEDQELTVG DKDVEALRNN 120 LPKDSGGSIY NSKVPLCNRG IISAKVSNGL SVTVEDSDIG LENHLVGGNL GSTNPEREST 180 QMDLQLENGK NQMASRSAAS KKRTRKLSHG ADVNIEQKRP AAAICDFYAK GWCIKGSSCS 240 FLHIKDNAIG SDQHSEEHAG AAYLKRQVQP NQGLQYSADA SKSPVFHHLP NSSFLKDSSL 300 SLKFGISSER TLPRDFTESK GWDVLHEKNK FLLHQREDSL LSELPDCQKL PSTSFDVSFP 360 LNREGSTARN EQPPEFGPSS GGFAKLSVME EPANVACPRL LNDYHSPVLR SSLNSNTTLT 420 KGGILSSRFT TSNDSFPFTP SSSASFFGAQ KMSIIDGEHR VSMPASSFMR SSPFSPSESD 480 NSLINASMNS SDYKTKYSCD DWEPSEPFRP SFFIPSINTA SQYDPFLDSI ELPRKVGGCH 540 NVSLDRQGHE EVSPLSTLHR ASGNFMVPGS SKPELNDDTS SLSSHNKAED KNEKAGHVEG 600 TDSLMFEAEI QGSSGIDGCN GSRTREDDHM GLSREKNVPK KMKTDTDGEI KLSNIAFHEK 660 ESEAESDRQL GDMDGKHLID GNVHKESKAT RHFRSALIEL VKGILRPKWR EGHLKKDVHN 720 TVVKKTLDKV LGTLQPFQVP TTVESVKQYL SSSRPKIEKL VEGYVSKYGK S |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G33835.1 | 7e-33 | C3H family protein |