PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023517413.1

Organism

Cucurbita pepo subsp. pepo

Taxonomic ID

3664

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo

Family

DBB

Protein Properties

Length: 152aa MW: 16617.8 Da PI: 5.5858

Description

DBB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023517413.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-B_box	25.1	3.8e-08	4	33	5	34
zf-B_box 5 kCpeHeekelqlfCedCqqllCedClleeH 34 C+ +e+ ++lfC ++ lC+ C ++ H XP_023517413.1 4 LCDSCENAAATLFCAADEAALCAACDVKVH 33 6**************************998 PP
2	zf-B_box	26.6	1.2e-08	52	92	2	38
zf-B_box 2 eerkCpeHeekelqlfCedCqqllCedClleeHkg....Ht 38 e +C+ +e+ ++ ++Ce +++ lC +C + H g H+ XP_023517413.1 52 EVSRCDICENAPAFFYCEIDGSSLCLQCDVLVHVGgkrmHK 92 6789**************************99966666776 PP

Sequence ? help Back to Top
Protein Sequence Length: 152 aa Download sequence
MRILCDSCEN AAATLFCAAD EAALCAACDV KVHMCNKLAS RHVRVGLASP SEVSRCDICE 60 NAPAFFYCEI DGSSLCLQCD VLVHVGGKRM HKRYLRLGQR VEFPGDKQND PKDLNVQAME 120 QAETVRGQNQ DGVDSNGDGH SKRGNEVIDL NM

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38960.1	1e-56	DBB family protein