PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023517302.1

Organism

Cucurbita pepo subsp. pepo

Taxonomic ID

3664

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo

Family

Protein Properties

Length: 412aa MW: 47350.4 Da PI: 9.914

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023517302.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	49.6	7e-16	14	99	8	98
-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTE.EEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE- CS B3 8 sdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgr.yvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfr 98 +++l+ + l++pkkf+++hg+ s+ ++l+ ++g +W+v l + +++ ++l++GW +F++ L+ g +vFk dg s+f ++f+ XP_023517302.1 14 HNNLEDRKLMIPKKFVKDHGE--LLSTSVRLKLPDGMEWKVGL--TTAPNGvVWLQNGWHKFAEHYSLEFGSLLVFKSDGFSTF--QTSIFD 99 55677778*********84..58999***********..77777779**********************5554555..777776 PP
2	B3	61.7	1.2e-19	201	287	1	88
EEEE-..-HHHHTT-EE--HHH.HTT....---..--SEEEEEETTS-EEEEEE..EEETTE.EEE-TTHHHHHHHHT--TT-EEEEEE-SSS CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh....ggkkeesktltledesgrsWevkliyrkksgr.yvltkGWkeFvkangLkegDfvvFkldgrs 88 f+ v+++++v + +++pk+fae+h ++l++++gr+W + ++ r++++ +++++GWk+Fv++n LkegD+ +F+l++++ XP_023517302.1 201 FKIVMKQPNVRGKFAMTIPKDFAEKHlpddF------GIIKLQTPNGRKWPLLYKRRRNQENfVYFSSGWKRFVEENVLKEGDIGLFQLIKKD 287 67789999999*************64321......26***********775444446***********************99754 PP
3	B3	42	1.7e-13	321	404	11	99
HHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE-S CS B3 11 lksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfrk 99 +k+ l +p fa+eh ++ +s +l++ + r+W v l r++++++ l++GW F +ngL++gD+++F+++++++ ++v++f++ XP_023517302.1 321 HKKFVLNIPMVFAKEHFSSDMRSAKLQVGN---RQWIVAL--RQYGSSVRLSAGWCLFYGDNGLEDGDSCLFEMVDTKNCVFKVTIFKH 404 5667799*******77767777777555...***..*****************************9987666678888875 PP

Sequence ? help Back to Top
Protein Sequence Length: 412 aa Download sequence
MAPSSPQFFR IVLHNNLEDR KLMIPKKFVK DHGELLSTSV RLKLPDGMEW KVGLTTAPNG 60 VVWLQNGWHK FAEHYSLEFG SLLVFKSDGF STFQTSIFDP SGVETEYCCI FNDSRAEFTM 120 EYEDSDENTE SSPLRLSKRK NKPSVPSPPQ SRKKMKPEEE GCLIIKNMPK TEAGVSSRRQ 180 QFVNKPEAAQ RFTSKSEKPI FKIVMKQPNV RGKFAMTIPK DFAEKHLPDD FGIIKLQTPN 240 GRKWPLLYKR RRNQENFVYF SSGWKRFVEE NVLKEGDIGL FQLIKKDIFS FTKLQDTSPF 300 PSPATNTRNP CFEANILNRR HKKFVLNIPM VFAKEHFSSD MRSAKLQVGN RQWIVALRQY 360 GSSVRLSAGW CLFYGDNGLE DGDSCLFEMV DTKNCVFKVT IFKHVSSSAS MD

Sequence ? help Back to Top

Protein Sequence Length: 412 aa Download sequence

MAPSSPQFFR IVLHNNLEDR KLMIPKKFVK DHGELLSTSV RLKLPDGMEW KVGLTTAPNG  60
VVWLQNGWHK FAEHYSLEFG SLLVFKSDGF STFQTSIFDP SGVETEYCCI FNDSRAEFTM  120
EYEDSDENTE SSPLRLSKRK NKPSVPSPPQ SRKKMKPEEE GCLIIKNMPK TEAGVSSRRQ  180
QFVNKPEAAQ RFTSKSEKPI FKIVMKQPNV RGKFAMTIPK DFAEKHLPDD FGIIKLQTPN  240
GRKWPLLYKR RRNQENFVYF SSGWKRFVEE NVLKEGDIGL FQLIKKDIFS FTKLQDTSPF  300
PSPATNTRNP CFEANILNRR HKKFVLNIPM VFAKEHFSSD MRSAKLQVGN RQWIVALRQY  360
GSSVRLSAGW CLFYGDNGLE DGDSCLFEMV DTKNCVFKVT IFKHVSSSAS MD

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G18990.1	3e-33	B3 family protein